Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RNF139Q8WU17 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RNF139Q8WU17 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RNF139Q8WU17 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.41■■□□□ 1.18
RNF139Q8WU17 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RNF139Q8WU17 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RNF139Q8WU17 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
RNF139Q8WU17 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.41■■□□□ 1.18
RNF139Q8WU17 AC079140.4-201ENST00000507448 529 ntBASIC22.41■■□□□ 1.18
RNF139Q8WU17 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.41■■□□□ 1.18
RNF139Q8WU17 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RNF139Q8WU17 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.41■■□□□ 1.18
RNF139Q8WU17 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RNF139Q8WU17 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
RNF139Q8WU17 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.41■■□□□ 1.18
RNF139Q8WU17 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RNF139Q8WU17 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
RNF139Q8WU17 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.41■■□□□ 1.18
RNF139Q8WU17 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
RNF139Q8WU17 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RNF139Q8WU17 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF139Q8WU17 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF139Q8WU17 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.4■■□□□ 1.18
RNF139Q8WU17 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RNF139Q8WU17 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RNF139Q8WU17 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
RNF139Q8WU17 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.4■■□□□ 1.18
RNF139Q8WU17 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
RNF139Q8WU17 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.4■■□□□ 1.18
RNF139Q8WU17 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RNF139Q8WU17 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF139Q8WU17 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RNF139Q8WU17 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF139Q8WU17 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF139Q8WU17 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.18
RNF139Q8WU17 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RNF139Q8WU17 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.39■■□□□ 1.18
RNF139Q8WU17 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.39■■□□□ 1.18
RNF139Q8WU17 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.39■■□□□ 1.18
RNF139Q8WU17 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RNF139Q8WU17 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.39■■□□□ 1.17
RNF139Q8WU17 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
RNF139Q8WU17 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.39■■□□□ 1.17
RNF139Q8WU17 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.39■■□□□ 1.17
RNF139Q8WU17 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RNF139Q8WU17 NTF6G-201ENST00000591094 616 ntBASIC22.39■■□□□ 1.17
RNF139Q8WU17 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.39■■□□□ 1.17
RNF139Q8WU17 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.39■■□□□ 1.17
RNF139Q8WU17 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RNF139Q8WU17 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.39■■□□□ 1.17
RNF139Q8WU17 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
RNF139Q8WU17 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
RNF139Q8WU17 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RNF139Q8WU17 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RNF139Q8WU17 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RNF139Q8WU17 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RNF139Q8WU17 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RNF139Q8WU17 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RNF139Q8WU17 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.38■■□□□ 1.17
RNF139Q8WU17 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RNF139Q8WU17 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.38■■□□□ 1.17
RNF139Q8WU17 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF139Q8WU17 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.37■■□□□ 1.17
RNF139Q8WU17 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF139Q8WU17 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF139Q8WU17 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RNF139Q8WU17 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
RNF139Q8WU17 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.37■■□□□ 1.17
RNF139Q8WU17 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF139Q8WU17 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
RNF139Q8WU17 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.37■■□□□ 1.17
RNF139Q8WU17 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.37■■□□□ 1.17
RNF139Q8WU17 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.37■■□□□ 1.17
RNF139Q8WU17 KRT18P5-201ENST00000436075 1291 ntBASIC22.37■■□□□ 1.17
RNF139Q8WU17 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.37■■□□□ 1.17
RNF139Q8WU17 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
RNF139Q8WU17 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
RNF139Q8WU17 AC055733.4-201ENST00000638462 1354 ntBASIC22.37■■□□□ 1.17
RNF139Q8WU17 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RNF139Q8WU17 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF139Q8WU17 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF139Q8WU17 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF139Q8WU17 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
RNF139Q8WU17 C11orf96-202ENST00000528572 1834 ntBASIC22.36■■□□□ 1.17
RNF139Q8WU17 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
RNF139Q8WU17 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF139Q8WU17 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RNF139Q8WU17 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.36■■□□□ 1.17
RNF139Q8WU17 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.36■■□□□ 1.17
RNF139Q8WU17 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.36■■□□□ 1.17
RNF139Q8WU17 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.36■■□□□ 1.17
RNF139Q8WU17 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.36■■□□□ 1.17
RNF139Q8WU17 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RNF139Q8WU17 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
RNF139Q8WU17 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF139Q8WU17 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
RNF139Q8WU17 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF139Q8WU17 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF139Q8WU17 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF139Q8WU17 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms