Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH19Q8TAB3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH19Q8TAB3 MIR572-201ENST00000384983 95 ntBASIC22.07■■□□□ 1.12
PCDH19Q8TAB3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH19Q8TAB3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDH19Q8TAB3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH19Q8TAB3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH19Q8TAB3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDH19Q8TAB3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH19Q8TAB3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
PCDH19Q8TAB3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH19Q8TAB3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
PCDH19Q8TAB3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH19Q8TAB3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH19Q8TAB3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH19Q8TAB3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.06■■□□□ 1.12
PCDH19Q8TAB3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH19Q8TAB3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH19Q8TAB3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH19Q8TAB3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDH19Q8TAB3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH19Q8TAB3 AL137060.1-201ENST00000618151 2648 ntBASIC22.05■■□□□ 1.12
PCDH19Q8TAB3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH19Q8TAB3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH19Q8TAB3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.05■■□□□ 1.12
PCDH19Q8TAB3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
PCDH19Q8TAB3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH19Q8TAB3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDH19Q8TAB3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDH19Q8TAB3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDH19Q8TAB3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDH19Q8TAB3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDH19Q8TAB3 Z98882.1-201ENST00000622160 2253 ntBASIC22.04■■□□□ 1.12
PCDH19Q8TAB3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDH19Q8TAB3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDH19Q8TAB3 AC026271.2-201ENST00000428091 497 ntBASIC22.04■■□□□ 1.12
PCDH19Q8TAB3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
PCDH19Q8TAB3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDH19Q8TAB3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.04■■□□□ 1.12
PCDH19Q8TAB3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDH19Q8TAB3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
PCDH19Q8TAB3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH19Q8TAB3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH19Q8TAB3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH19Q8TAB3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH19Q8TAB3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH19Q8TAB3 AC104564.3-201ENST00000582367 638 ntBASIC22.03■■□□□ 1.12
PCDH19Q8TAB3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDH19Q8TAB3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH19Q8TAB3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.03■■□□□ 1.12
PCDH19Q8TAB3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH19Q8TAB3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH19Q8TAB3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH19Q8TAB3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH19Q8TAB3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH19Q8TAB3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDH19Q8TAB3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH19Q8TAB3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDH19Q8TAB3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDH19Q8TAB3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH19Q8TAB3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
PCDH19Q8TAB3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDH19Q8TAB3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH19Q8TAB3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDH19Q8TAB3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.02■■□□□ 1.12
PCDH19Q8TAB3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDH19Q8TAB3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH19Q8TAB3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
PCDH19Q8TAB3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.02■■□□□ 1.11
PCDH19Q8TAB3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
PCDH19Q8TAB3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
PCDH19Q8TAB3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PCDH19Q8TAB3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH19Q8TAB3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH19Q8TAB3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH19Q8TAB3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PCDH19Q8TAB3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH19Q8TAB3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDH19Q8TAB3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.01■■□□□ 1.11
PCDH19Q8TAB3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDH19Q8TAB3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH19Q8TAB3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.01■■□□□ 1.11
PCDH19Q8TAB3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH19Q8TAB3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH19Q8TAB3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
PCDH19Q8TAB3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH19Q8TAB3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH19Q8TAB3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH19Q8TAB3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH19Q8TAB3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22■■□□□ 1.11
PCDH19Q8TAB3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22■■□□□ 1.11
PCDH19Q8TAB3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDH19Q8TAB3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDH19Q8TAB3 AC009237.3-201ENST00000393279 1427 ntBASIC21.99■■□□□ 1.11
PCDH19Q8TAB3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDH19Q8TAB3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDH19Q8TAB3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH19Q8TAB3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH19Q8TAB3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDH19Q8TAB3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms