Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.17■□□□□ 0.66
BBS1Q8NFJ9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.17■□□□□ 0.66
BBS1Q8NFJ9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BBS1Q8NFJ9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BBS1Q8NFJ9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BBS1Q8NFJ9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.16■□□□□ 0.66
BBS1Q8NFJ9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.16■□□□□ 0.66
BBS1Q8NFJ9 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
BBS1Q8NFJ9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BBS1Q8NFJ9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.16■□□□□ 0.66
BBS1Q8NFJ9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.16■□□□□ 0.66
BBS1Q8NFJ9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.16■□□□□ 0.66
BBS1Q8NFJ9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
BBS1Q8NFJ9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BBS1Q8NFJ9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.16■□□□□ 0.66
BBS1Q8NFJ9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
BBS1Q8NFJ9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.16■□□□□ 0.66
BBS1Q8NFJ9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BBS1Q8NFJ9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
BBS1Q8NFJ9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BBS1Q8NFJ9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
BBS1Q8NFJ9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.15■□□□□ 0.66
BBS1Q8NFJ9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.15■□□□□ 0.66
BBS1Q8NFJ9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.15■□□□□ 0.66
BBS1Q8NFJ9 MIR3181-201ENST00000578512 73 ntBASIC19.15■□□□□ 0.66
BBS1Q8NFJ9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BBS1Q8NFJ9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.15■□□□□ 0.66
BBS1Q8NFJ9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BBS1Q8NFJ9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BBS1Q8NFJ9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BBS1Q8NFJ9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
BBS1Q8NFJ9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BBS1Q8NFJ9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BBS1Q8NFJ9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.15■□□□□ 0.66
BBS1Q8NFJ9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.14■□□□□ 0.66
BBS1Q8NFJ9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
BBS1Q8NFJ9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
BBS1Q8NFJ9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BBS1Q8NFJ9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BBS1Q8NFJ9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BBS1Q8NFJ9 KRT16P3-201ENST00000439127 1283 ntBASIC19.14■□□□□ 0.65
BBS1Q8NFJ9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.14■□□□□ 0.65
BBS1Q8NFJ9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BBS1Q8NFJ9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BBS1Q8NFJ9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.14■□□□□ 0.65
BBS1Q8NFJ9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
BBS1Q8NFJ9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BBS1Q8NFJ9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BBS1Q8NFJ9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
BBS1Q8NFJ9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
BBS1Q8NFJ9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.14■□□□□ 0.65
BBS1Q8NFJ9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BBS1Q8NFJ9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
BBS1Q8NFJ9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BBS1Q8NFJ9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BBS1Q8NFJ9 AC010525.1-201ENST00000585559 441 ntBASIC19.13■□□□□ 0.65
BBS1Q8NFJ9 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.13■□□□□ 0.65
BBS1Q8NFJ9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.13■□□□□ 0.65
BBS1Q8NFJ9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
BBS1Q8NFJ9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BBS1Q8NFJ9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
BBS1Q8NFJ9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BBS1Q8NFJ9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BBS1Q8NFJ9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
BBS1Q8NFJ9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BBS1Q8NFJ9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BBS1Q8NFJ9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
BBS1Q8NFJ9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
BBS1Q8NFJ9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.12■□□□□ 0.65
BBS1Q8NFJ9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BBS1Q8NFJ9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BBS1Q8NFJ9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
BBS1Q8NFJ9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
BBS1Q8NFJ9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
BBS1Q8NFJ9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BBS1Q8NFJ9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BBS1Q8NFJ9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 OR2I1P-207ENST00000453522 948 ntBASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
BBS1Q8NFJ9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms