Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYNPOQ8N3V7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SYNPOQ8N3V7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYNPOQ8N3V7 OR10C1-204ENST00000622521 1039 ntBASIC21.75■■□□□ 1.07
SYNPOQ8N3V7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SYNPOQ8N3V7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SYNPOQ8N3V7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.75■■□□□ 1.07
SYNPOQ8N3V7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SYNPOQ8N3V7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
SYNPOQ8N3V7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPOQ8N3V7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPOQ8N3V7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPOQ8N3V7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPOQ8N3V7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPOQ8N3V7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.74■■□□□ 1.07
SYNPOQ8N3V7 POU5F1P3-201ENST00000428824 1078 ntBASIC21.74■■□□□ 1.07
SYNPOQ8N3V7 EEF1DP3-203ENST00000566025 782 ntBASIC21.74■■□□□ 1.07
SYNPOQ8N3V7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPOQ8N3V7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPOQ8N3V7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNPOQ8N3V7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
SYNPOQ8N3V7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.74■■□□□ 1.07
SYNPOQ8N3V7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SYNPOQ8N3V7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SYNPOQ8N3V7 AC068338.2-201ENST00000563278 1430 ntBASIC21.73■■□□□ 1.07
SYNPOQ8N3V7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.73■■□□□ 1.07
SYNPOQ8N3V7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SYNPOQ8N3V7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SYNPOQ8N3V7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNPOQ8N3V7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SYNPOQ8N3V7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.73■■□□□ 1.07
SYNPOQ8N3V7 AC053503.5-201ENST00000601508 636 ntBASIC21.73■■□□□ 1.07
SYNPOQ8N3V7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNPOQ8N3V7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNPOQ8N3V7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNPOQ8N3V7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.73■■□□□ 1.07
SYNPOQ8N3V7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.72■■□□□ 1.07
SYNPOQ8N3V7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.72■■□□□ 1.07
SYNPOQ8N3V7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNPOQ8N3V7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNPOQ8N3V7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNPOQ8N3V7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.72■■□□□ 1.07
SYNPOQ8N3V7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.72■■□□□ 1.07
SYNPOQ8N3V7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNPOQ8N3V7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.72■■□□□ 1.07
SYNPOQ8N3V7 MIPEPP3-201ENST00000412105 444 ntBASIC21.72■■□□□ 1.07
SYNPOQ8N3V7 AL512625.2-201ENST00000417533 625 ntBASIC21.72■■□□□ 1.07
SYNPOQ8N3V7 ITM2C-210ENST00000620962 501 ntBASIC21.72■■□□□ 1.07
SYNPOQ8N3V7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SYNPOQ8N3V7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SYNPOQ8N3V7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNPOQ8N3V7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.72■■□□□ 1.07
SYNPOQ8N3V7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYNPOQ8N3V7 MKRN4P-201ENST00000444706 1521 ntBASIC21.71■■□□□ 1.07
SYNPOQ8N3V7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SYNPOQ8N3V7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.71■■□□□ 1.07
SYNPOQ8N3V7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.71■■□□□ 1.07
SYNPOQ8N3V7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SYNPOQ8N3V7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.71■■□□□ 1.07
SYNPOQ8N3V7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SYNPOQ8N3V7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.71■■□□□ 1.07
SYNPOQ8N3V7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
SYNPOQ8N3V7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.71■■□□□ 1.07
SYNPOQ8N3V7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.71■■□□□ 1.07
SYNPOQ8N3V7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYNPOQ8N3V7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.71■■□□□ 1.07
SYNPOQ8N3V7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.71■■□□□ 1.07
SYNPOQ8N3V7 LINC01960-201ENST00000563759 1884 ntBASIC21.71■■□□□ 1.07
SYNPOQ8N3V7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SYNPOQ8N3V7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SYNPOQ8N3V7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
SYNPOQ8N3V7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
SYNPOQ8N3V7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYNPOQ8N3V7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.7■■□□□ 1.06
SYNPOQ8N3V7 CYP2T1P-201ENST00000432607 1285 ntBASIC21.7■■□□□ 1.06
SYNPOQ8N3V7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.7■■□□□ 1.06
SYNPOQ8N3V7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYNPOQ8N3V7 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.7■■□□□ 1.06
SYNPOQ8N3V7 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.7■■□□□ 1.06
SYNPOQ8N3V7 AC008694.1-202ENST00000636953 945 ntBASIC21.7■■□□□ 1.06
SYNPOQ8N3V7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
SYNPOQ8N3V7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYNPOQ8N3V7 OR7E47P-201ENST00000546390 1422 ntBASIC21.7■■□□□ 1.06
SYNPOQ8N3V7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SYNPOQ8N3V7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.7■■□□□ 1.06
SYNPOQ8N3V7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SYNPOQ8N3V7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYNPOQ8N3V7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYNPOQ8N3V7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYNPOQ8N3V7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYNPOQ8N3V7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SYNPOQ8N3V7 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.69■■□□□ 1.06
SYNPOQ8N3V7 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.69■■□□□ 1.06
SYNPOQ8N3V7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.69■■□□□ 1.06
SYNPOQ8N3V7 AC098934.4-201ENST00000564127 592 ntBASIC21.69■■□□□ 1.06
SYNPOQ8N3V7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.69■■□□□ 1.06
SYNPOQ8N3V7 AC092118.2-201ENST00000613495 667 ntBASIC21.69■■□□□ 1.06
SYNPOQ8N3V7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYNPOQ8N3V7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYNPOQ8N3V7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms