Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 BX323043.1-201ENST00000641006 1765 ntBASIC18.73■□□□□ 0.59
LYSMD2Q8IV50 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD2Q8IV50 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD2Q8IV50 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
LYSMD2Q8IV50 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.73■□□□□ 0.59
LYSMD2Q8IV50 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.72■□□□□ 0.59
LYSMD2Q8IV50 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.72■□□□□ 0.59
LYSMD2Q8IV50 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD2Q8IV50 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.72■□□□□ 0.59
LYSMD2Q8IV50 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD2Q8IV50 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.72■□□□□ 0.59
LYSMD2Q8IV50 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD2Q8IV50 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.72■□□□□ 0.59
LYSMD2Q8IV50 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD2Q8IV50 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD2Q8IV50 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 AC073314.1-201ENST00000568729 2216 ntBASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD2Q8IV50 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
LYSMD2Q8IV50 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.71■□□□□ 0.58
LYSMD2Q8IV50 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD2Q8IV50 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD2Q8IV50 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.7■□□□□ 0.58
LYSMD2Q8IV50 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.7■□□□□ 0.58
LYSMD2Q8IV50 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD2Q8IV50 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LYSMD2Q8IV50 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LYSMD2Q8IV50 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD2Q8IV50 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD2Q8IV50 DUX4L9-201ENST00000449051 1259 ntBASIC18.7■□□□□ 0.58
LYSMD2Q8IV50 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.7■□□□□ 0.58
LYSMD2Q8IV50 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.7■□□□□ 0.58
LYSMD2Q8IV50 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD2Q8IV50 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LYSMD2Q8IV50 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LYSMD2Q8IV50 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD2Q8IV50 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD2Q8IV50 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LYSMD2Q8IV50 AC098818.2-201ENST00000564925 2320 ntBASIC18.69■□□□□ 0.58
LYSMD2Q8IV50 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.69■□□□□ 0.58
LYSMD2Q8IV50 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD2Q8IV50 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD2Q8IV50 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.69■□□□□ 0.58
LYSMD2Q8IV50 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD2Q8IV50 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.69■□□□□ 0.58
LYSMD2Q8IV50 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.69■□□□□ 0.58
LYSMD2Q8IV50 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD2Q8IV50 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD2Q8IV50 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
LYSMD2Q8IV50 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD2Q8IV50 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD2Q8IV50 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD2Q8IV50 OXCT2P1-201ENST00000447263 1535 ntBASIC18.69■□□□□ 0.58
LYSMD2Q8IV50 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD2Q8IV50 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD2Q8IV50 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD2Q8IV50 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LYSMD2Q8IV50 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD2Q8IV50 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD2Q8IV50 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD2Q8IV50 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD2Q8IV50 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD2Q8IV50 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD2Q8IV50 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
LYSMD2Q8IV50 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD2Q8IV50 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.68■□□□□ 0.58
LYSMD2Q8IV50 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD2Q8IV50 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD2Q8IV50 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD2Q8IV50 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD2Q8IV50 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.68■□□□□ 0.58
LYSMD2Q8IV50 AC026471.1-201ENST00000564629 3026 ntBASIC18.68■□□□□ 0.58
LYSMD2Q8IV50 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
LYSMD2Q8IV50 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LYSMD2Q8IV50 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD2Q8IV50 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms