Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC28Q86X40 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC28Q86X40 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
LRRC28Q86X40 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRRC28Q86X40 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
LRRC28Q86X40 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.89■□□□□ 0.61
LRRC28Q86X40 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC28Q86X40 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC28Q86X40 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC28Q86X40 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC28Q86X40 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.88■□□□□ 0.61
LRRC28Q86X40 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC28Q86X40 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC28Q86X40 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC28Q86X40 UNC93B3-201ENST00000308076 687 ntBASIC18.88■□□□□ 0.61
LRRC28Q86X40 AC241377.3-202ENST00000626088 1088 ntBASIC18.88■□□□□ 0.61
LRRC28Q86X40 AC241585.3-202ENST00000628937 1088 ntBASIC18.88■□□□□ 0.61
LRRC28Q86X40 AC245100.8-202ENST00000629247 1058 ntBASIC18.88■□□□□ 0.61
LRRC28Q86X40 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC28Q86X40 AF106564.1-201ENST00000607058 2553 ntBASIC18.88■□□□□ 0.61
LRRC28Q86X40 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LRRC28Q86X40 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC28Q86X40 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC28Q86X40 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.88■□□□□ 0.61
LRRC28Q86X40 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC28Q86X40 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC28Q86X40 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC28Q86X40 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC28Q86X40 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.87■□□□□ 0.61
LRRC28Q86X40 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC28Q86X40 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC28Q86X40 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC28Q86X40 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC28Q86X40 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.87■□□□□ 0.61
LRRC28Q86X40 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.87■□□□□ 0.61
LRRC28Q86X40 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC28Q86X40 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC28Q86X40 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC28Q86X40 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC28Q86X40 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC28Q86X40 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
LRRC28Q86X40 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC28Q86X40 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.87■□□□□ 0.61
LRRC28Q86X40 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC28Q86X40 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC28Q86X40 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
LRRC28Q86X40 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC28Q86X40 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC28Q86X40 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC28Q86X40 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC28Q86X40 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC28Q86X40 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC28Q86X40 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
LRRC28Q86X40 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC28Q86X40 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC28Q86X40 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.86■□□□□ 0.61
LRRC28Q86X40 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LRRC28Q86X40 AC133561.4-201ENST00000566112 224 ntBASIC18.86■□□□□ 0.61
LRRC28Q86X40 AC099791.2-201ENST00000605725 427 ntBASIC18.86■□□□□ 0.61
LRRC28Q86X40 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC28Q86X40 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LRRC28Q86X40 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC28Q86X40 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.86■□□□□ 0.61
LRRC28Q86X40 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC28Q86X40 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC28Q86X40 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.86■□□□□ 0.61
LRRC28Q86X40 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.86■□□□□ 0.61
LRRC28Q86X40 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.86■□□□□ 0.61
LRRC28Q86X40 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC28Q86X40 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC28Q86X40 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC28Q86X40 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC28Q86X40 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC28Q86X40 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC28Q86X40 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC28Q86X40 MIR638-201ENST00000385237 100 ntBASIC18.85■□□□□ 0.61
LRRC28Q86X40 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.85■□□□□ 0.61
LRRC28Q86X40 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC28Q86X40 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.85■□□□□ 0.61
LRRC28Q86X40 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.85■□□□□ 0.61
LRRC28Q86X40 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC28Q86X40 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC28Q86X40 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC28Q86X40 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC28Q86X40 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC28Q86X40 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LRRC28Q86X40 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC28Q86X40 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC28Q86X40 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LRRC28Q86X40 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC28Q86X40 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC28Q86X40 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC28Q86X40 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.84■□□□□ 0.61
LRRC28Q86X40 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC28Q86X40 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.84■□□□□ 0.61
LRRC28Q86X40 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC28Q86X40 PBX2P1-201ENST00000493219 1291 ntBASIC18.84■□□□□ 0.61
LRRC28Q86X40 AL136162.1-201ENST00000607711 1078 ntBASIC18.84■□□□□ 0.61
LRRC28Q86X40 AC106739.1-201ENST00000617035 715 ntBASIC18.84■□□□□ 0.61
LRRC28Q86X40 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms