Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.2■□□□□ 0.98
ZC3HC1Q86WB0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
ZC3HC1Q86WB0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3HC1Q86WB0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.2■□□□□ 0.98
ZC3HC1Q86WB0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.2■□□□□ 0.98
ZC3HC1Q86WB0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.2■□□□□ 0.98
ZC3HC1Q86WB0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
ZC3HC1Q86WB0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.2■□□□□ 0.98
ZC3HC1Q86WB0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3HC1Q86WB0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3HC1Q86WB0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3HC1Q86WB0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3HC1Q86WB0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3HC1Q86WB0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 SMUG1P1-201ENST00000590640 811 ntBASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3HC1Q86WB0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZC3HC1Q86WB0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZC3HC1Q86WB0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.18■□□□□ 0.98
ZC3HC1Q86WB0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZC3HC1Q86WB0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.18■□□□□ 0.98
ZC3HC1Q86WB0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZC3HC1Q86WB0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZC3HC1Q86WB0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ZC3HC1Q86WB0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.18■□□□□ 0.98
ZC3HC1Q86WB0 AC024257.2-201ENST00000549699 147 ntBASIC21.18■□□□□ 0.98
ZC3HC1Q86WB0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.18■□□□□ 0.98
ZC3HC1Q86WB0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.18■□□□□ 0.98
ZC3HC1Q86WB0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ZC3HC1Q86WB0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZC3HC1Q86WB0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ZC3HC1Q86WB0 AP006587.3-201ENST00000525742 1516 ntBASIC21.18■□□□□ 0.98
ZC3HC1Q86WB0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZC3HC1Q86WB0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 AC233992.3-201ENST00000607491 485 ntBASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 AL136162.1-201ENST00000607711 1078 ntBASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 AC131212.1-201ENST00000613771 668 ntBASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZC3HC1Q86WB0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3HC1Q86WB0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3HC1Q86WB0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3HC1Q86WB0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.16■□□□□ 0.98
ZC3HC1Q86WB0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3HC1Q86WB0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.16■□□□□ 0.98
ZC3HC1Q86WB0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3HC1Q86WB0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ZC3HC1Q86WB0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZC3HC1Q86WB0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3HC1Q86WB0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3HC1Q86WB0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3HC1Q86WB0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3HC1Q86WB0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZC3HC1Q86WB0 AC135279.3-201ENST00000610945 1311 ntBASIC21.15■□□□□ 0.98
ZC3HC1Q86WB0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ZC3HC1Q86WB0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.15■□□□□ 0.98
ZC3HC1Q86WB0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms