Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
FAM53AQ6NSI3 BX842568.3-201ENST00000418104 571 ntBASIC17.67■□□□□ 0.42
FAM53AQ6NSI3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.67■□□□□ 0.42
FAM53AQ6NSI3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM53AQ6NSI3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FAM53AQ6NSI3 AC244015.2-201ENST00000616358 1861 ntBASIC17.67■□□□□ 0.42
FAM53AQ6NSI3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FAM53AQ6NSI3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM53AQ6NSI3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 Z98882.1-201ENST00000622160 2253 ntBASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FAM53AQ6NSI3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FAM53AQ6NSI3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
FAM53AQ6NSI3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FAM53AQ6NSI3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.65■□□□□ 0.42
FAM53AQ6NSI3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
FAM53AQ6NSI3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.65■□□□□ 0.42
FAM53AQ6NSI3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
FAM53AQ6NSI3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FAM53AQ6NSI3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FAM53AQ6NSI3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.65■□□□□ 0.42
FAM53AQ6NSI3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FAM53AQ6NSI3 AC233992.3-201ENST00000607491 485 ntBASIC17.65■□□□□ 0.42
FAM53AQ6NSI3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.65■□□□□ 0.42
FAM53AQ6NSI3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.65■□□□□ 0.42
FAM53AQ6NSI3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.65■□□□□ 0.42
FAM53AQ6NSI3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.65■□□□□ 0.42
FAM53AQ6NSI3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.65■□□□□ 0.42
FAM53AQ6NSI3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FAM53AQ6NSI3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.65■□□□□ 0.42
FAM53AQ6NSI3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FAM53AQ6NSI3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FAM53AQ6NSI3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.64■□□□□ 0.42
FAM53AQ6NSI3 AP004607.7-201ENST00000527152 1677 ntBASIC17.64■□□□□ 0.42
FAM53AQ6NSI3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FAM53AQ6NSI3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.64■□□□□ 0.41
FAM53AQ6NSI3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FAM53AQ6NSI3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FAM53AQ6NSI3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FAM53AQ6NSI3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.64■□□□□ 0.41
FAM53AQ6NSI3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.64■□□□□ 0.41
FAM53AQ6NSI3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FAM53AQ6NSI3 AC126544.1-201ENST00000580842 1059 ntBASIC17.64■□□□□ 0.41
FAM53AQ6NSI3 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.64■□□□□ 0.41
FAM53AQ6NSI3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FAM53AQ6NSI3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
FAM53AQ6NSI3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FAM53AQ6NSI3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
FAM53AQ6NSI3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
FAM53AQ6NSI3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FAM53AQ6NSI3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FAM53AQ6NSI3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FAM53AQ6NSI3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.63■□□□□ 0.41
FAM53AQ6NSI3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FAM53AQ6NSI3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FAM53AQ6NSI3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.63■□□□□ 0.41
FAM53AQ6NSI3 AC099791.1-201ENST00000416440 715 ntBASIC17.63■□□□□ 0.41
FAM53AQ6NSI3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
FAM53AQ6NSI3 AC133561.4-201ENST00000566112 224 ntBASIC17.63■□□□□ 0.41
FAM53AQ6NSI3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FAM53AQ6NSI3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FAM53AQ6NSI3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FAM53AQ6NSI3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FAM53AQ6NSI3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FAM53AQ6NSI3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
FAM53AQ6NSI3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.63■□□□□ 0.41
FAM53AQ6NSI3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FAM53AQ6NSI3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.63■□□□□ 0.41
FAM53AQ6NSI3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FAM53AQ6NSI3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
FAM53AQ6NSI3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
FAM53AQ6NSI3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FAM53AQ6NSI3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
FAM53AQ6NSI3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.62■□□□□ 0.41
FAM53AQ6NSI3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FAM53AQ6NSI3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FAM53AQ6NSI3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms