Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FAM78BQ5VT40 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
FAM78BQ5VT40 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.85■□□□□ 0.29
FAM78BQ5VT40 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FAM78BQ5VT40 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
FAM78BQ5VT40 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.85■□□□□ 0.29
FAM78BQ5VT40 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.85■□□□□ 0.29
FAM78BQ5VT40 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
FAM78BQ5VT40 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.85■□□□□ 0.29
FAM78BQ5VT40 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FAM78BQ5VT40 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 FEM1AP4-201ENST00000443167 1987 ntBASIC16.84■□□□□ 0.29
FAM78BQ5VT40 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 AC021242.3-201ENST00000607598 1377 ntBASIC16.84■□□□□ 0.29
FAM78BQ5VT40 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM78BQ5VT40 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
FAM78BQ5VT40 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
FAM78BQ5VT40 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
FAM78BQ5VT40 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 KRT125P-201ENST00000546827 989 ntBASIC16.83■□□□□ 0.28
FAM78BQ5VT40 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 MIR6722-201ENST00000617286 78 ntBASIC16.83■□□□□ 0.28
FAM78BQ5VT40 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM78BQ5VT40 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FAM78BQ5VT40 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM78BQ5VT40 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM78BQ5VT40 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM78BQ5VT40 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM78BQ5VT40 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.81■□□□□ 0.28
FAM78BQ5VT40 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
FAM78BQ5VT40 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
FAM78BQ5VT40 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.81■□□□□ 0.28
FAM78BQ5VT40 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM78BQ5VT40 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms