Protein–RNA interactions for Protein: Q5R3I4

TTC38, Tetratricopeptide repeat protein 38, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38Q5R3I4 AC003102.1-202ENST00000563394 1796 ntBASIC24.33■■□□□ 1.49
TTC38Q5R3I4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.33■■□□□ 1.49
TTC38Q5R3I4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TTC38Q5R3I4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
TTC38Q5R3I4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
TTC38Q5R3I4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TTC38Q5R3I4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TTC38Q5R3I4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TTC38Q5R3I4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TTC38Q5R3I4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
TTC38Q5R3I4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.32■■□□□ 1.48
TTC38Q5R3I4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
TTC38Q5R3I4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TTC38Q5R3I4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.32■■□□□ 1.48
TTC38Q5R3I4 AC009237.3-201ENST00000393279 1427 ntBASIC24.32■■□□□ 1.48
TTC38Q5R3I4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TTC38Q5R3I4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.32■■□□□ 1.48
TTC38Q5R3I4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TTC38Q5R3I4 CLDN5-201ENST00000403084 2357 ntBASIC24.31■■□□□ 1.48
TTC38Q5R3I4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TTC38Q5R3I4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TTC38Q5R3I4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TTC38Q5R3I4 AC104564.3-201ENST00000582367 638 ntBASIC24.31■■□□□ 1.48
TTC38Q5R3I4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.31■■□□□ 1.48
TTC38Q5R3I4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
TTC38Q5R3I4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
TTC38Q5R3I4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC24.31■■□□□ 1.48
TTC38Q5R3I4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
TTC38Q5R3I4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC24.3■■□□□ 1.48
TTC38Q5R3I4 IRS3P-201ENST00000223076 1006 ntBASIC24.3■■□□□ 1.48
TTC38Q5R3I4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
TTC38Q5R3I4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.3■■□□□ 1.48
TTC38Q5R3I4 AL354811.1-201ENST00000610286 706 ntBASIC24.3■■□□□ 1.48
TTC38Q5R3I4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.3■■□□□ 1.48
TTC38Q5R3I4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TTC38Q5R3I4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
TTC38Q5R3I4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TTC38Q5R3I4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.29■■□□□ 1.48
TTC38Q5R3I4 MIR6084-201ENST00000622012 110 ntBASIC24.29■■□□□ 1.48
TTC38Q5R3I4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TTC38Q5R3I4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24.29■■□□□ 1.48
TTC38Q5R3I4 AC005224.4-201ENST00000583262 1652 ntBASIC24.29■■□□□ 1.48
TTC38Q5R3I4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TTC38Q5R3I4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TTC38Q5R3I4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC24.29■■□□□ 1.48
TTC38Q5R3I4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TTC38Q5R3I4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC24.29■■□□□ 1.48
TTC38Q5R3I4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.29■■□□□ 1.48
TTC38Q5R3I4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TTC38Q5R3I4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TTC38Q5R3I4 AC007375.3-201ENST00000600936 2314 ntBASIC24.28■■□□□ 1.48
TTC38Q5R3I4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TTC38Q5R3I4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.28■■□□□ 1.48
TTC38Q5R3I4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.28■■□□□ 1.48
TTC38Q5R3I4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.28■■□□□ 1.48
TTC38Q5R3I4 AL358852.1-201ENST00000623174 1268 ntBASIC24.28■■□□□ 1.48
TTC38Q5R3I4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TTC38Q5R3I4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
TTC38Q5R3I4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
TTC38Q5R3I4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
TTC38Q5R3I4 AC055733.4-201ENST00000638462 1354 ntBASIC24.28■■□□□ 1.48
TTC38Q5R3I4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
TTC38Q5R3I4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
TTC38Q5R3I4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
TTC38Q5R3I4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC24.27■■□□□ 1.48
TTC38Q5R3I4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.27■■□□□ 1.48
TTC38Q5R3I4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
TTC38Q5R3I4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.27■■□□□ 1.48
TTC38Q5R3I4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
TTC38Q5R3I4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TTC38Q5R3I4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TTC38Q5R3I4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TTC38Q5R3I4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC24.26■■□□□ 1.47
TTC38Q5R3I4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TTC38Q5R3I4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TTC38Q5R3I4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TTC38Q5R3I4 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.26■■□□□ 1.47
TTC38Q5R3I4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TTC38Q5R3I4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TTC38Q5R3I4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TTC38Q5R3I4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.26■■□□□ 1.47
TTC38Q5R3I4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.26■■□□□ 1.47
TTC38Q5R3I4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TTC38Q5R3I4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TTC38Q5R3I4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TTC38Q5R3I4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TTC38Q5R3I4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TTC38Q5R3I4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
TTC38Q5R3I4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TTC38Q5R3I4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TTC38Q5R3I4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
TTC38Q5R3I4 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.25■■□□□ 1.47
TTC38Q5R3I4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TTC38Q5R3I4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC24.25■■□□□ 1.47
TTC38Q5R3I4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.25■■□□□ 1.47
TTC38Q5R3I4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.25■■□□□ 1.47
TTC38Q5R3I4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC24.25■■□□□ 1.47
TTC38Q5R3I4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TTC38Q5R3I4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC24.25■■□□□ 1.47
TTC38Q5R3I4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms