Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTSL3PQ5NE16 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CTSL3PQ5NE16 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.08■□□□□ 0.97
CTSL3PQ5NE16 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTSL3PQ5NE16 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CTSL3PQ5NE16 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.08■□□□□ 0.97
CTSL3PQ5NE16 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.08■□□□□ 0.97
CTSL3PQ5NE16 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.08■□□□□ 0.97
CTSL3PQ5NE16 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.08■□□□□ 0.96
CTSL3PQ5NE16 AC026310.3-201ENST00000625186 2373 ntBASIC21.08■□□□□ 0.96
CTSL3PQ5NE16 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CTSL3PQ5NE16 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CTSL3PQ5NE16 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.07■□□□□ 0.96
CTSL3PQ5NE16 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTSL3PQ5NE16 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CTSL3PQ5NE16 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTSL3PQ5NE16 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.07■□□□□ 0.96
CTSL3PQ5NE16 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CTSL3PQ5NE16 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTSL3PQ5NE16 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTSL3PQ5NE16 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTSL3PQ5NE16 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.07■□□□□ 0.96
CTSL3PQ5NE16 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTSL3PQ5NE16 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTSL3PQ5NE16 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTSL3PQ5NE16 AC009237.3-201ENST00000393279 1427 ntBASIC21.06■□□□□ 0.96
CTSL3PQ5NE16 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTSL3PQ5NE16 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTSL3PQ5NE16 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTSL3PQ5NE16 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.06■□□□□ 0.96
CTSL3PQ5NE16 AC104564.3-201ENST00000582367 638 ntBASIC21.06■□□□□ 0.96
CTSL3PQ5NE16 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.06■□□□□ 0.96
CTSL3PQ5NE16 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTSL3PQ5NE16 AC055733.4-201ENST00000638462 1354 ntBASIC21.06■□□□□ 0.96
CTSL3PQ5NE16 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTSL3PQ5NE16 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.06■□□□□ 0.96
CTSL3PQ5NE16 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSL3PQ5NE16 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSL3PQ5NE16 AC005224.4-201ENST00000583262 1652 ntBASIC21.05■□□□□ 0.96
CTSL3PQ5NE16 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.05■□□□□ 0.96
CTSL3PQ5NE16 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSL3PQ5NE16 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.05■□□□□ 0.96
CTSL3PQ5NE16 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSL3PQ5NE16 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.05■□□□□ 0.96
CTSL3PQ5NE16 Z98882.1-201ENST00000622160 2253 ntBASIC21.05■□□□□ 0.96
CTSL3PQ5NE16 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.05■□□□□ 0.96
CTSL3PQ5NE16 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.05■□□□□ 0.96
CTSL3PQ5NE16 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.05■□□□□ 0.96
CTSL3PQ5NE16 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.05■□□□□ 0.96
CTSL3PQ5NE16 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.05■□□□□ 0.96
CTSL3PQ5NE16 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTSL3PQ5NE16 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CTSL3PQ5NE16 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSL3PQ5NE16 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSL3PQ5NE16 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTSL3PQ5NE16 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTSL3PQ5NE16 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.04■□□□□ 0.96
CTSL3PQ5NE16 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTSL3PQ5NE16 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.04■□□□□ 0.96
CTSL3PQ5NE16 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CTSL3PQ5NE16 IRS3P-201ENST00000223076 1006 ntBASIC21.04■□□□□ 0.96
CTSL3PQ5NE16 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.04■□□□□ 0.96
CTSL3PQ5NE16 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTSL3PQ5NE16 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CTSL3PQ5NE16 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
CTSL3PQ5NE16 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.04■□□□□ 0.96
CTSL3PQ5NE16 MIR6084-201ENST00000622012 110 ntBASIC21.04■□□□□ 0.96
CTSL3PQ5NE16 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CTSL3PQ5NE16 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTSL3PQ5NE16 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTSL3PQ5NE16 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSL3PQ5NE16 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSL3PQ5NE16 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CTSL3PQ5NE16 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.03■□□□□ 0.96
CTSL3PQ5NE16 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSL3PQ5NE16 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSL3PQ5NE16 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.03■□□□□ 0.96
CTSL3PQ5NE16 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSL3PQ5NE16 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CTSL3PQ5NE16 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
CTSL3PQ5NE16 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.03■□□□□ 0.96
CTSL3PQ5NE16 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.03■□□□□ 0.96
CTSL3PQ5NE16 AL354811.1-201ENST00000610286 706 ntBASIC21.03■□□□□ 0.96
CTSL3PQ5NE16 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSL3PQ5NE16 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSL3PQ5NE16 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CTSL3PQ5NE16 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSL3PQ5NE16 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CTSL3PQ5NE16 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.02■□□□□ 0.96
CTSL3PQ5NE16 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTSL3PQ5NE16 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CTSL3PQ5NE16 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.02■□□□□ 0.96
CTSL3PQ5NE16 TPRG1LP1-201ENST00000598702 760 ntBASIC21.02■□□□□ 0.96
CTSL3PQ5NE16 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.02■□□□□ 0.96
CTSL3PQ5NE16 AL358852.1-201ENST00000623174 1268 ntBASIC21.02■□□□□ 0.96
CTSL3PQ5NE16 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CTSL3PQ5NE16 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CTSL3PQ5NE16 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTSL3PQ5NE16 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
CTSL3PQ5NE16 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms