Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SFT2D3Q587I9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.78■□□□□ 0.92
SFT2D3Q587I9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SFT2D3Q587I9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SFT2D3Q587I9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SFT2D3Q587I9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SFT2D3Q587I9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.78■□□□□ 0.92
SFT2D3Q587I9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.78■□□□□ 0.92
SFT2D3Q587I9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SFT2D3Q587I9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.77■□□□□ 0.92
SFT2D3Q587I9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SFT2D3Q587I9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.77■□□□□ 0.92
SFT2D3Q587I9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
SFT2D3Q587I9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.77■□□□□ 0.92
SFT2D3Q587I9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.77■□□□□ 0.92
SFT2D3Q587I9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.77■□□□□ 0.92
SFT2D3Q587I9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SFT2D3Q587I9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SFT2D3Q587I9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SFT2D3Q587I9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.77■□□□□ 0.92
SFT2D3Q587I9 AC099791.1-201ENST00000416440 715 ntBASIC20.77■□□□□ 0.92
SFT2D3Q587I9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.77■□□□□ 0.92
SFT2D3Q587I9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SFT2D3Q587I9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.77■□□□□ 0.92
SFT2D3Q587I9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SFT2D3Q587I9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.91
SFT2D3Q587I9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SFT2D3Q587I9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SFT2D3Q587I9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SFT2D3Q587I9 AL353803.4-201ENST00000565882 1934 ntBASIC20.76■□□□□ 0.91
SFT2D3Q587I9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.76■□□□□ 0.91
SFT2D3Q587I9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SFT2D3Q587I9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SFT2D3Q587I9 RASA4CP-201ENST00000424092 1398 ntBASIC20.76■□□□□ 0.91
SFT2D3Q587I9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SFT2D3Q587I9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
SFT2D3Q587I9 BX842568.3-201ENST00000418104 571 ntBASIC20.76■□□□□ 0.91
SFT2D3Q587I9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.76■□□□□ 0.91
SFT2D3Q587I9 AC233992.3-201ENST00000607491 485 ntBASIC20.76■□□□□ 0.91
SFT2D3Q587I9 CA15P2-201ENST00000611168 834 ntBASIC20.76■□□□□ 0.91
SFT2D3Q587I9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SFT2D3Q587I9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SFT2D3Q587I9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
SFT2D3Q587I9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.76■□□□□ 0.91
SFT2D3Q587I9 LINC01521-201ENST00000504184 1943 ntBASIC20.76■□□□□ 0.91
SFT2D3Q587I9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.75■□□□□ 0.91
SFT2D3Q587I9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SFT2D3Q587I9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SFT2D3Q587I9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.75■□□□□ 0.91
SFT2D3Q587I9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.75■□□□□ 0.91
SFT2D3Q587I9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.75■□□□□ 0.91
SFT2D3Q587I9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.75■□□□□ 0.91
SFT2D3Q587I9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SFT2D3Q587I9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.75■□□□□ 0.91
SFT2D3Q587I9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SFT2D3Q587I9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SFT2D3Q587I9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SFT2D3Q587I9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SFT2D3Q587I9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
SFT2D3Q587I9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SFT2D3Q587I9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SFT2D3Q587I9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SFT2D3Q587I9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SFT2D3Q587I9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.74■□□□□ 0.91
SFT2D3Q587I9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SFT2D3Q587I9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SFT2D3Q587I9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SFT2D3Q587I9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.74■□□□□ 0.91
SFT2D3Q587I9 ZNRF2P3-201ENST00000424200 374 ntBASIC20.74■□□□□ 0.91
SFT2D3Q587I9 SLC47A1P1-202ENST00000449666 945 ntBASIC20.74■□□□□ 0.91
SFT2D3Q587I9 AC105265.2-201ENST00000467189 838 ntBASIC20.74■□□□□ 0.91
SFT2D3Q587I9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SFT2D3Q587I9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SFT2D3Q587I9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SFT2D3Q587I9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SFT2D3Q587I9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SFT2D3Q587I9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.74■□□□□ 0.91
SFT2D3Q587I9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SFT2D3Q587I9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SFT2D3Q587I9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SFT2D3Q587I9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SFT2D3Q587I9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
SFT2D3Q587I9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SFT2D3Q587I9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
SFT2D3Q587I9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SFT2D3Q587I9 AL391422.3-201ENST00000603791 2761 ntBASIC20.73■□□□□ 0.91
SFT2D3Q587I9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.73■□□□□ 0.91
SFT2D3Q587I9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SFT2D3Q587I9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.73■□□□□ 0.91
SFT2D3Q587I9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SFT2D3Q587I9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SFT2D3Q587I9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SFT2D3Q587I9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SFT2D3Q587I9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SFT2D3Q587I9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SFT2D3Q587I9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SFT2D3Q587I9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SFT2D3Q587I9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SFT2D3Q587I9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SFT2D3Q587I9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms