Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.63■□□□□ 0.73
SMIM11AP58511 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMIM11AP58511 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
SMIM11AP58511 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SMIM11AP58511 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SMIM11AP58511 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.63■□□□□ 0.73
SMIM11AP58511 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SMIM11AP58511 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMIM11AP58511 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.62■□□□□ 0.73
SMIM11AP58511 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMIM11AP58511 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMIM11AP58511 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.62■□□□□ 0.73
SMIM11AP58511 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.62■□□□□ 0.73
SMIM11AP58511 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMIM11AP58511 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.62■□□□□ 0.73
SMIM11AP58511 AL356740.2-201ENST00000601559 647 ntBASIC19.62■□□□□ 0.73
SMIM11AP58511 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SMIM11AP58511 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.62■□□□□ 0.73
SMIM11AP58511 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SMIM11AP58511 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.61■□□□□ 0.73
SMIM11AP58511 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.61■□□□□ 0.73
SMIM11AP58511 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.61■□□□□ 0.73
SMIM11AP58511 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.61■□□□□ 0.73
SMIM11AP58511 KRT16P3-201ENST00000439127 1283 ntBASIC19.61■□□□□ 0.73
SMIM11AP58511 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.61■□□□□ 0.73
SMIM11AP58511 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.61■□□□□ 0.73
SMIM11AP58511 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.61■□□□□ 0.73
SMIM11AP58511 MIR3181-201ENST00000578512 73 ntBASIC19.61■□□□□ 0.73
SMIM11AP58511 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMIM11AP58511 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.61■□□□□ 0.73
SMIM11AP58511 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.61■□□□□ 0.73
SMIM11AP58511 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMIM11AP58511 AF106564.1-201ENST00000607058 2553 ntBASIC19.61■□□□□ 0.73
SMIM11AP58511 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SMIM11AP58511 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMIM11AP58511 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.6■□□□□ 0.73
SMIM11AP58511 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.6■□□□□ 0.73
SMIM11AP58511 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMIM11AP58511 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMIM11AP58511 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMIM11AP58511 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMIM11AP58511 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SMIM11AP58511 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMIM11AP58511 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMIM11AP58511 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMIM11AP58511 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMIM11AP58511 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.6■□□□□ 0.73
SMIM11AP58511 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
SMIM11AP58511 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMIM11AP58511 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.6■□□□□ 0.73
SMIM11AP58511 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SMIM11AP58511 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.59■□□□□ 0.73
SMIM11AP58511 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM11AP58511 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SMIM11AP58511 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM11AP58511 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM11AP58511 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM11AP58511 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM11AP58511 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM11AP58511 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SMIM11AP58511 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SMIM11AP58511 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM11AP58511 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SMIM11AP58511 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM11AP58511 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM11AP58511 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.59■□□□□ 0.73
SMIM11AP58511 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.59■□□□□ 0.73
SMIM11AP58511 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM11AP58511 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM11AP58511 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM11AP58511 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.59■□□□□ 0.73
SMIM11AP58511 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM11AP58511 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM11AP58511 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.59■□□□□ 0.73
SMIM11AP58511 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.58■□□□□ 0.73
SMIM11AP58511 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMIM11AP58511 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMIM11AP58511 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMIM11AP58511 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMIM11AP58511 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.58■□□□□ 0.72
SMIM11AP58511 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.58■□□□□ 0.72
SMIM11AP58511 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SMIM11AP58511 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMIM11AP58511 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMIM11AP58511 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SMIM11AP58511 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.57■□□□□ 0.72
SMIM11AP58511 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM11AP58511 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.57■□□□□ 0.72
SMIM11AP58511 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SMIM11AP58511 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SMIM11AP58511 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.57■□□□□ 0.72
SMIM11AP58511 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.57■□□□□ 0.72
SMIM11AP58511 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM11AP58511 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.57■□□□□ 0.72
SMIM11AP58511 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM11AP58511 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM11AP58511 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.56■□□□□ 0.72
SMIM11AP58511 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM11AP58511 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM11AP58511 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms