Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 Z98882.1-201ENST00000622160 2253 ntBASIC19.46■□□□□ 0.71
CDH11P55287 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH11P55287 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH11P55287 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CDH11P55287 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH11P55287 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH11P55287 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH11P55287 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.46■□□□□ 0.71
CDH11P55287 ZNRF2P3-201ENST00000424200 374 ntBASIC19.46■□□□□ 0.71
CDH11P55287 AC011298.3-201ENST00000615796 283 ntBASIC19.46■□□□□ 0.71
CDH11P55287 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH11P55287 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH11P55287 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CDH11P55287 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CDH11P55287 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CDH11P55287 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CDH11P55287 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH11P55287 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH11P55287 SLC25A24-204ENST00000569674 2357 ntBASIC19.46■□□□□ 0.71
CDH11P55287 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH11P55287 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CDH11P55287 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH11P55287 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH11P55287 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CDH11P55287 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH11P55287 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH11P55287 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.45■□□□□ 0.7
CDH11P55287 AC006455.2-201ENST00000429931 906 ntBASIC19.45■□□□□ 0.7
CDH11P55287 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH11P55287 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CDH11P55287 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH11P55287 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH11P55287 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH11P55287 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CDH11P55287 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CDH11P55287 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.45■□□□□ 0.7
CDH11P55287 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH11P55287 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.44■□□□□ 0.7
CDH11P55287 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH11P55287 MIR939-201ENST00000401314 82 ntBASIC19.44■□□□□ 0.7
CDH11P55287 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH11P55287 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.44■□□□□ 0.7
CDH11P55287 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.44■□□□□ 0.7
CDH11P55287 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CDH11P55287 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CDH11P55287 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.44■□□□□ 0.7
CDH11P55287 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH11P55287 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH11P55287 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.44■□□□□ 0.7
CDH11P55287 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH11P55287 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
CDH11P55287 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.43■□□□□ 0.7
CDH11P55287 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH11P55287 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDH11P55287 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH11P55287 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH11P55287 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH11P55287 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CDH11P55287 AC105265.2-201ENST00000467189 838 ntBASIC19.43■□□□□ 0.7
CDH11P55287 AC091305.1-201ENST00000479476 895 ntBASIC19.43■□□□□ 0.7
CDH11P55287 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.43■□□□□ 0.7
CDH11P55287 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.43■□□□□ 0.7
CDH11P55287 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH11P55287 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH11P55287 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.43■□□□□ 0.7
CDH11P55287 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH11P55287 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH11P55287 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CDH11P55287 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH11P55287 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH11P55287 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH11P55287 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH11P55287 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CDH11P55287 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH11P55287 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH11P55287 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.42■□□□□ 0.7
CDH11P55287 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.42■□□□□ 0.7
CDH11P55287 AC027682.1-201ENST00000562846 899 ntBASIC19.42■□□□□ 0.7
CDH11P55287 AL136967.2-201ENST00000623968 743 ntBASIC19.42■□□□□ 0.7
CDH11P55287 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH11P55287 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH11P55287 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH11P55287 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH11P55287 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH11P55287 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH11P55287 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH11P55287 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH11P55287 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH11P55287 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH11P55287 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CDH11P55287 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CDH11P55287 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.41■□□□□ 0.7
CDH11P55287 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.41■□□□□ 0.7
CDH11P55287 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH11P55287 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH11P55287 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.41■□□□□ 0.7
CDH11P55287 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.41■□□□□ 0.7
CDH11P55287 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.41■□□□□ 0.7
CDH11P55287 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH11P55287 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms