Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.39■□□□□ 0.85
POLR2JP52435 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR2JP52435 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.39■□□□□ 0.85
POLR2JP52435 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR2JP52435 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.38■□□□□ 0.85
POLR2JP52435 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
POLR2JP52435 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR2JP52435 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR2JP52435 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.38■□□□□ 0.85
POLR2JP52435 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.38■□□□□ 0.85
POLR2JP52435 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
POLR2JP52435 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR2JP52435 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR2JP52435 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
POLR2JP52435 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
POLR2JP52435 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.38■□□□□ 0.85
POLR2JP52435 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.38■□□□□ 0.85
POLR2JP52435 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR2JP52435 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.38■□□□□ 0.85
POLR2JP52435 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR2JP52435 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
POLR2JP52435 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
POLR2JP52435 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR2JP52435 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.37■□□□□ 0.85
POLR2JP52435 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.37■□□□□ 0.85
POLR2JP52435 AL356740.2-201ENST00000601559 647 ntBASIC20.37■□□□□ 0.85
POLR2JP52435 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.37■□□□□ 0.85
POLR2JP52435 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
POLR2JP52435 AL157384.1-201ENST00000445995 2473 ntBASIC20.37■□□□□ 0.85
POLR2JP52435 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR2JP52435 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR2JP52435 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR2JP52435 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
POLR2JP52435 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.37■□□□□ 0.85
POLR2JP52435 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
POLR2JP52435 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
POLR2JP52435 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
POLR2JP52435 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
POLR2JP52435 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
POLR2JP52435 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
POLR2JP52435 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.36■□□□□ 0.85
POLR2JP52435 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
POLR2JP52435 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
POLR2JP52435 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
POLR2JP52435 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
POLR2JP52435 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.35■□□□□ 0.85
POLR2JP52435 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.35■□□□□ 0.85
POLR2JP52435 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.35■□□□□ 0.85
POLR2JP52435 OXCT2P1-201ENST00000447263 1535 ntBASIC20.35■□□□□ 0.85
POLR2JP52435 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.35■□□□□ 0.85
POLR2JP52435 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
POLR2JP52435 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
POLR2JP52435 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.35■□□□□ 0.85
POLR2JP52435 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
POLR2JP52435 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR2JP52435 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.34■□□□□ 0.85
POLR2JP52435 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2JP52435 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2JP52435 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2JP52435 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2JP52435 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2JP52435 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2JP52435 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
POLR2JP52435 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
POLR2JP52435 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2JP52435 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2JP52435 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.34■□□□□ 0.85
POLR2JP52435 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.34■□□□□ 0.85
POLR2JP52435 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.34■□□□□ 0.85
POLR2JP52435 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2JP52435 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2JP52435 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2JP52435 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2JP52435 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2JP52435 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2JP52435 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2JP52435 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2JP52435 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2JP52435 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.34■□□□□ 0.85
POLR2JP52435 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2JP52435 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
POLR2JP52435 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
POLR2JP52435 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.33■□□□□ 0.85
POLR2JP52435 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
POLR2JP52435 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
POLR2JP52435 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
POLR2JP52435 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
POLR2JP52435 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
POLR2JP52435 AC010525.1-201ENST00000585559 441 ntBASIC20.33■□□□□ 0.85
POLR2JP52435 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
POLR2JP52435 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
POLR2JP52435 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
POLR2JP52435 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
POLR2JP52435 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
POLR2JP52435 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR2JP52435 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR2JP52435 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR2JP52435 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
POLR2JP52435 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR2JP52435 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms