Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.8■■□□□ 1.4
CPT1AP50416 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.8■■□□□ 1.4
CPT1AP50416 AC008694.1-202ENST00000636953 945 ntBASIC23.8■■□□□ 1.4
CPT1AP50416 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.8■■□□□ 1.4
CPT1AP50416 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CPT1AP50416 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CPT1AP50416 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CPT1AP50416 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CPT1AP50416 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CPT1AP50416 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.79■■□□□ 1.4
CPT1AP50416 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CPT1AP50416 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CPT1AP50416 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.79■■□□□ 1.4
CPT1AP50416 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CPT1AP50416 FAM201B-201ENST00000458407 597 ntBASIC23.79■■□□□ 1.4
CPT1AP50416 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.79■■□□□ 1.4
CPT1AP50416 MIR4651-201ENST00000582622 73 ntBASIC23.79■■□□□ 1.4
CPT1AP50416 AC069236.1-201ENST00000604339 616 ntBASIC23.79■■□□□ 1.4
CPT1AP50416 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.79■■□□□ 1.4
CPT1AP50416 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.79■■□□□ 1.4
CPT1AP50416 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CPT1AP50416 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.79■■□□□ 1.4
CPT1AP50416 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CPT1AP50416 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CPT1AP50416 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.79■■□□□ 1.4
CPT1AP50416 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPT1AP50416 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPT1AP50416 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPT1AP50416 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPT1AP50416 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.78■■□□□ 1.4
CPT1AP50416 POU5F1P4-201ENST00000413175 1085 ntBASIC23.78■■□□□ 1.4
CPT1AP50416 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.78■■□□□ 1.4
CPT1AP50416 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
CPT1AP50416 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.78■■□□□ 1.4
CPT1AP50416 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
CPT1AP50416 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.78■■□□□ 1.4
CPT1AP50416 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPT1AP50416 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CPT1AP50416 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.77■■□□□ 1.4
CPT1AP50416 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CPT1AP50416 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
CPT1AP50416 MIPEPP3-201ENST00000412105 444 ntBASIC23.77■■□□□ 1.4
CPT1AP50416 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CPT1AP50416 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CPT1AP50416 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.77■■□□□ 1.4
CPT1AP50416 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.77■■□□□ 1.4
CPT1AP50416 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.77■■□□□ 1.4
CPT1AP50416 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.77■■□□□ 1.4
CPT1AP50416 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CPT1AP50416 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CPT1AP50416 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CPT1AP50416 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CPT1AP50416 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPT1AP50416 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.76■■□□□ 1.39
CPT1AP50416 AC087742.1-201ENST00000575880 1738 ntBASIC23.76■■□□□ 1.39
CPT1AP50416 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CPT1AP50416 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPT1AP50416 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPT1AP50416 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPT1AP50416 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.76■■□□□ 1.39
CPT1AP50416 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPT1AP50416 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.76■■□□□ 1.39
CPT1AP50416 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CPT1AP50416 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPT1AP50416 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CPT1AP50416 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CPT1AP50416 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.76■■□□□ 1.39
CPT1AP50416 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.76■■□□□ 1.39
CPT1AP50416 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.75■■□□□ 1.39
CPT1AP50416 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CPT1AP50416 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CPT1AP50416 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.75■■□□□ 1.39
CPT1AP50416 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.75■■□□□ 1.39
CPT1AP50416 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.75■■□□□ 1.39
CPT1AP50416 AL512625.2-201ENST00000417533 625 ntBASIC23.75■■□□□ 1.39
CPT1AP50416 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CPT1AP50416 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CPT1AP50416 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.75■■□□□ 1.39
CPT1AP50416 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.75■■□□□ 1.39
CPT1AP50416 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
CPT1AP50416 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CPT1AP50416 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CPT1AP50416 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
CPT1AP50416 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CPT1AP50416 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CPT1AP50416 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPT1AP50416 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPT1AP50416 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
CPT1AP50416 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.74■■□□□ 1.39
CPT1AP50416 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.74■■□□□ 1.39
CPT1AP50416 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CPT1AP50416 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.74■■□□□ 1.39
CPT1AP50416 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.74■■□□□ 1.39
CPT1AP50416 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPT1AP50416 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.74■■□□□ 1.39
CPT1AP50416 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPT1AP50416 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CPT1AP50416 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPT1AP50416 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.73■■□□□ 1.39
CPT1AP50416 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms