Protein–RNA interactions for Protein: P49954

NIT3, Omega-amidase NIT3, yeast

Predictions only

Length 291 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
NIT3	P49954	SEN15	YMR059W	387 nt		4.38	□□□□□ -1.71
NIT3	P49954	PHO88	YBR106W	567 nt		4.38	□□□□□ -1.71
NIT3	P49954	FYV5	YCL058C	459 nt		4.38	□□□□□ -1.71
NIT3	P49954	DBP3	YGL078C	1572 nt		4.38	□□□□□ -1.71
NIT3	P49954	TAF12	YDR145W	1620 nt		4.38	□□□□□ -1.71
NIT3	P49954	PHO84	YML123C	1764 nt		4.37	□□□□□ -1.71
NIT3	P49954	GSY1	YFR015C	2127 nt		4.37	□□□□□ -1.71
NIT3	P49954	YBP2	YGL060W	1926 nt		4.37	□□□□□ -1.71
NIT3	P49954	JEM1	YJL073W	1938 nt		4.37	□□□□□ -1.71
NIT3	P49954	YCR013C	YCR013C	648 nt		4.37	□□□□□ -1.71
NIT3	P49954	PBP4	YDL053C	558 nt		4.37	□□□□□ -1.71
NIT3	P49954	FIN1	YDR130C	876 nt		4.37	□□□□□ -1.71
NIT3	P49954	HOM2	YDR158W	1098 nt		4.37	□□□□□ -1.71
NIT3	P49954	GIM4	YEL003W	336 nt		4.37	□□□□□ -1.71
NIT3	P49954	SLX8	YER116C	825 nt		4.37	□□□□□ -1.71
NIT3	P49954	YGR035W-A	YGR035W-A	222 nt		4.37	□□□□□ -1.71
NIT3	P49954	LRP1	YHR081W	555 nt		4.37	□□□□□ -1.71
NIT3	P49954	NNF1	YJR112W	606 nt		4.37	□□□□□ -1.71
NIT3	P49954	YKL023W	YKL023W	834 nt		4.37	□□□□□ -1.71
NIT3	P49954	ATG10	YLL042C	504 nt		4.37	□□□□□ -1.71
NIT3	P49954	YMR087W	YMR087W	855 nt		4.37	□□□□□ -1.71
NIT3	P49954	IST1	YNL265C	897 nt		4.37	□□□□□ -1.71
NIT3	P49954	YNL276C	YNL276C	396 nt		4.37	□□□□□ -1.71
NIT3	P49954	MSN1	YOL116W	1149 nt		4.37	□□□□□ -1.71
NIT3	P49954	RBL2	YOR265W	321 nt		4.37	□□□□□ -1.71
NIT3	P49954	snR17b	snR17b	332 nt		4.37	□□□□□ -1.71
NIT3	P49954	VBA2	YBR293W	1425 nt		4.37	□□□□□ -1.71
NIT3	P49954	WHI3	YNL197C	1986 nt		4.36	□□□□□ -1.71
NIT3	P49954	MSH1	YHR120W	2880 nt		4.36	□□□□□ -1.71
NIT3	P49954	VPS33	YLR396C	2076 nt		4.36	□□□□□ -1.71
NIT3	P49954	EPT1	YHR123W	1176 nt		4.36	□□□□□ -1.71
NIT3	P49954	YET1	YKL065C	621 nt		4.36	□□□□□ -1.71
NIT3	P49954	SRP21	YKL122C	504 nt		4.36	□□□□□ -1.71
NIT3	P49954	YML057C-A	YML057C-A	390 nt		4.36	□□□□□ -1.71
NIT3	P49954	YPL035C	YPL035C	348 nt		4.36	□□□□□ -1.71
NIT3	P49954	CUR1	YPR158W	759 nt		4.36	□□□□□ -1.71
NIT3	P49954	YKL075C	YKL075C	1353 nt		4.36	□□□□□ -1.71
NIT3	P49954	MSC2	YDR205W	2175 nt		4.36	□□□□□ -1.71
NIT3	P49954	YER084W-A	YER084W-A	513 nt		4.35	□□□□□ -1.71
NIT3	P49954	BI2	Q0110	1272 nt		4.35	□□□□□ -1.71
NIT3	P49954	SLX9	YGR081C	633 nt		4.35	□□□□□ -1.71
NIT3	P49954	UBX4	YMR067C	1251 nt		4.35	□□□□□ -1.71
NIT3	P49954	PDR10	YOR328W	4695 nt		4.35	□□□□□ -1.71
NIT3	P49954	TOM5	YPR133W-A	153 nt		4.35	□□□□□ -1.71
NIT3	P49954	PFK1	YGR240C	2964 nt		4.35	□□□□□ -1.71
NIT3	P49954	SAT4	YCR008W	1812 nt		4.35	□□□□□ -1.71
NIT3	P49954	BBC1	YJL020C	3474 nt		4.34	□□□□□ -1.71
NIT3	P49954	KRE6	YPR159W	2163 nt		4.34	□□□□□ -1.71
NIT3	P49954	YDR199W	YDR199W	366 nt		4.34	□□□□□ -1.71
NIT3	P49954	YDR417C	YDR417C	372 nt		4.34	□□□□□ -1.71
NIT3	P49954	THI5	YFL058W	1023 nt		4.34	□□□□□ -1.71
NIT3	P49954	GOS1	YHL031C	672 nt		4.34	□□□□□ -1.71
NIT3	P49954	AIM22	YJL046W	1230 nt		4.34	□□□□□ -1.71
NIT3	P49954	EAF6	YJR082C	342 nt		4.34	□□□□□ -1.71
NIT3	P49954	OAR1	YKL055C	837 nt		4.34	□□□□□ -1.71
NIT3	P49954	THI12	YNL332W	1023 nt		4.34	□□□□□ -1.71
NIT3	P49954	ECM23	YPL021W	564 nt		4.34	□□□□□ -1.71
NIT3	P49954	DIB1	YPR082C	432 nt		4.34	□□□□□ -1.71
NIT3	P49954	UBX7	YBR273C	1311 nt		4.34	□□□□□ -1.71
NIT3	P49954	NSA1	YGL111W	1392 nt		4.34	□□□□□ -1.71
NIT3	P49954	RRN11	YML043C	1524 nt		4.34	□□□□□ -1.71
NIT3	P49954	SEC27	YGL137W	2670 nt		4.33	□□□□□ -1.72
NIT3	P49954	GYP6	YJL044C	1377 nt		4.33	□□□□□ -1.72
NIT3	P49954	SPO73	YER046W	432 nt		4.33	□□□□□ -1.72
NIT3	P49954	TAM41	YGR046W	1158 nt		4.33	□□□□□ -1.72
NIT3	P49954	CIC1	YHR052W	1131 nt		4.33	□□□□□ -1.72
NIT3	P49954	YHC1	YLR298C	696 nt		4.33	□□□□□ -1.72
NIT3	P49954	YLR334C	YLR334C	381 nt		4.33	□□□□□ -1.72
NIT3	P49954	AIM36	YMR157C	768 nt		4.33	□□□□□ -1.72
NIT3	P49954	PRM3	YPL192C	402 nt		4.33	□□□□□ -1.72
NIT3	P49954	PTR3	YFR029W	2037 nt		4.33	□□□□□ -1.72
NIT3	P49954	SWP82	YFL049W	1872 nt		4.32	□□□□□ -1.72
NIT3	P49954	EPO1	YMR124W	2832 nt		4.32	□□□□□ -1.72
NIT3	P49954	HCM1	YCR065W	1695 nt		4.32	□□□□□ -1.72
NIT3	P49954	CIT1	YNR001C	1440 nt		4.32	□□□□□ -1.72
NIT3	P49954	RGL1	YPL066W	1440 nt		4.32	□□□□□ -1.72
NIT3	P49954	TUB2	YFL037W	1374 nt		4.32	□□□□□ -1.72
NIT3	P49954	YDL187C	YDL187C	330 nt		4.32	□□□□□ -1.72
NIT3	P49954	ECM11	YDR446W	909 nt		4.32	□□□□□ -1.72
NIT3	P49954	TRX2	YGR209C	315 nt		4.32	□□□□□ -1.72
NIT3	P49954	NSG1	YHR133C	876 nt		4.32	□□□□□ -1.72
NIT3	P49954	YHR213W	YHR213W	597 nt		4.32	□□□□□ -1.72
NIT3	P49954	RGI2	YIL057C	495 nt		4.32	□□□□□ -1.72
NIT3	P49954	YAR062W	YAR062W	597 nt		4.32	□□□□□ -1.72
NIT3	P49954	SWS2	YNL081C	432 nt		4.32	□□□□□ -1.72
NIT3	P49954	YOR022C	YOR022C	2148 nt		4.32	□□□□□ -1.72
NIT3	P49954	RET3	YPL010W	570 nt		4.32	□□□□□ -1.72
NIT3	P49954	SUS1	YBR111W-A	291 nt		4.32	□□□□□ -1.72
NIT3	P49954	OPT2	YPR194C	2634 nt		4.32	□□□□□ -1.72
NIT3	P49954	PAH1	YMR165C	2589 nt		4.32	□□□□□ -1.72
NIT3	P49954	YSH1	YLR277C	2340 nt		4.32	□□□□□ -1.72
NIT3	P49954	ASM4	YDL088C	1587 nt		4.31	□□□□□ -1.72
NIT3	P49954	ERG11	YHR007C	1593 nt		4.31	□□□□□ -1.72
NIT3	P49954	LAS1	YKR063C	1509 nt		4.31	□□□□□ -1.72
NIT3	P49954	KAR2	YJL034W	2049 nt		4.31	□□□□□ -1.72
NIT3	P49954	STE24	YJR117W	1362 nt		4.31	□□□□□ -1.72
NIT3	P49954	NOP6	YDL213C	678 nt		4.31	□□□□□ -1.72
NIT3	P49954	MIX14	YDR031W	366 nt		4.31	□□□□□ -1.72
NIT3	P49954	LRS4	YDR439W	1044 nt		4.31	□□□□□ -1.72
NIT3	P49954	YHI9	YHR029C	885 nt		4.31	□□□□□ -1.72

Retrieved 100 of 7,029 protein–RNA pairs in 19.4 ms