Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLK3P49761 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLK3P49761 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.13■□□□□ 0.81
CLK3P49761 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLK3P49761 BX842568.3-201ENST00000418104 571 ntBASIC20.13■□□□□ 0.81
CLK3P49761 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.13■□□□□ 0.81
CLK3P49761 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
CLK3P49761 AL355001.2-201ENST00000620617 1191 ntBASIC20.13■□□□□ 0.81
CLK3P49761 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.13■□□□□ 0.81
CLK3P49761 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLK3P49761 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLK3P49761 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLK3P49761 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.12■□□□□ 0.81
CLK3P49761 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLK3P49761 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CLK3P49761 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.12■□□□□ 0.81
CLK3P49761 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
CLK3P49761 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.12■□□□□ 0.81
CLK3P49761 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.12■□□□□ 0.81
CLK3P49761 AC233992.3-201ENST00000607491 485 ntBASIC20.12■□□□□ 0.81
CLK3P49761 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.12■□□□□ 0.81
CLK3P49761 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLK3P49761 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLK3P49761 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CLK3P49761 LINC01960-201ENST00000563759 1884 ntBASIC20.11■□□□□ 0.81
CLK3P49761 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLK3P49761 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLK3P49761 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.11■□□□□ 0.81
CLK3P49761 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLK3P49761 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLK3P49761 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLK3P49761 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.11■□□□□ 0.81
CLK3P49761 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.11■□□□□ 0.81
CLK3P49761 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.11■□□□□ 0.81
CLK3P49761 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.11■□□□□ 0.81
CLK3P49761 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.11■□□□□ 0.81
CLK3P49761 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLK3P49761 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLK3P49761 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CLK3P49761 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.11■□□□□ 0.81
CLK3P49761 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLK3P49761 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLK3P49761 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CLK3P49761 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLK3P49761 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLK3P49761 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CLK3P49761 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.1■□□□□ 0.81
CLK3P49761 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.1■□□□□ 0.81
CLK3P49761 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLK3P49761 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLK3P49761 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CLK3P49761 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CLK3P49761 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLK3P49761 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.1■□□□□ 0.81
CLK3P49761 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.1■□□□□ 0.81
CLK3P49761 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.1■□□□□ 0.81
CLK3P49761 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.1■□□□□ 0.81
CLK3P49761 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.1■□□□□ 0.81
CLK3P49761 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CLK3P49761 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CLK3P49761 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.1■□□□□ 0.81
CLK3P49761 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
CLK3P49761 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLK3P49761 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLK3P49761 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLK3P49761 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.09■□□□□ 0.81
CLK3P49761 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.09■□□□□ 0.81
CLK3P49761 SLC47A1P1-202ENST00000449666 945 ntBASIC20.09■□□□□ 0.81
CLK3P49761 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLK3P49761 AC027682.1-201ENST00000562846 899 ntBASIC20.09■□□□□ 0.81
CLK3P49761 AC126544.1-201ENST00000580842 1059 ntBASIC20.09■□□□□ 0.81
CLK3P49761 AC008764.7-201ENST00000593779 1081 ntBASIC20.09■□□□□ 0.81
CLK3P49761 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLK3P49761 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLK3P49761 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLK3P49761 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CLK3P49761 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLK3P49761 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.09■□□□□ 0.81
CLK3P49761 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CLK3P49761 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLK3P49761 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLK3P49761 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLK3P49761 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLK3P49761 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CLK3P49761 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLK3P49761 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLK3P49761 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLK3P49761 AP005435.1-201ENST00000529293 1178 ntBASIC20.08■□□□□ 0.81
CLK3P49761 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLK3P49761 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.08■□□□□ 0.8
CLK3P49761 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.08■□□□□ 0.8
CLK3P49761 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLK3P49761 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLK3P49761 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLK3P49761 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLK3P49761 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLK3P49761 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CLK3P49761 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.07■□□□□ 0.8
CLK3P49761 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLK3P49761 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms