Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.58■□□□□ 0.4
THBS3P49746 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
THBS3P49746 DUX4L19-201ENST00000557448 1267 ntBASIC17.58■□□□□ 0.4
THBS3P49746 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.58■□□□□ 0.4
THBS3P49746 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.58■□□□□ 0.4
THBS3P49746 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
THBS3P49746 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.58■□□□□ 0.4
THBS3P49746 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
THBS3P49746 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
THBS3P49746 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
THBS3P49746 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.58■□□□□ 0.4
THBS3P49746 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
THBS3P49746 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
THBS3P49746 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
THBS3P49746 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
THBS3P49746 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THBS3P49746 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
THBS3P49746 AC135279.3-201ENST00000610945 1311 ntBASIC17.57■□□□□ 0.4
THBS3P49746 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
THBS3P49746 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THBS3P49746 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.57■□□□□ 0.4
THBS3P49746 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
THBS3P49746 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.57■□□□□ 0.4
THBS3P49746 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
THBS3P49746 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
THBS3P49746 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
THBS3P49746 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
THBS3P49746 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
THBS3P49746 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
THBS3P49746 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
THBS3P49746 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THBS3P49746 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THBS3P49746 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THBS3P49746 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THBS3P49746 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.56■□□□□ 0.4
THBS3P49746 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.56■□□□□ 0.4
THBS3P49746 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THBS3P49746 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.56■□□□□ 0.4
THBS3P49746 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.56■□□□□ 0.4
THBS3P49746 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THBS3P49746 AL138724.1-201ENST00000606771 1088 ntBASIC17.56■□□□□ 0.4
THBS3P49746 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
THBS3P49746 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.56■□□□□ 0.4
THBS3P49746 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THBS3P49746 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
THBS3P49746 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THBS3P49746 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
THBS3P49746 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
THBS3P49746 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THBS3P49746 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
THBS3P49746 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
THBS3P49746 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THBS3P49746 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
THBS3P49746 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
THBS3P49746 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.55■□□□□ 0.4
THBS3P49746 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THBS3P49746 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.55■□□□□ 0.4
THBS3P49746 SYT6-210ENST00000641643 1587 ntBASIC17.55■□□□□ 0.4
THBS3P49746 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.55■□□□□ 0.4
THBS3P49746 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
THBS3P49746 AC010141.3-201ENST00000456659 717 ntBASIC17.55■□□□□ 0.4
THBS3P49746 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
THBS3P49746 AC142381.2-201ENST00000566120 298 ntBASIC17.55■□□□□ 0.4
THBS3P49746 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THBS3P49746 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THBS3P49746 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THBS3P49746 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
THBS3P49746 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
THBS3P49746 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
THBS3P49746 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
THBS3P49746 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
THBS3P49746 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THBS3P49746 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
THBS3P49746 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.54■□□□□ 0.4
THBS3P49746 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
THBS3P49746 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
THBS3P49746 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THBS3P49746 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.54■□□□□ 0.4
THBS3P49746 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
THBS3P49746 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.54■□□□□ 0.4
THBS3P49746 AC024257.2-201ENST00000549699 147 ntBASIC17.54■□□□□ 0.4
THBS3P49746 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.54■□□□□ 0.4
THBS3P49746 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
THBS3P49746 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.54■□□□□ 0.4
THBS3P49746 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THBS3P49746 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THBS3P49746 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.54■□□□□ 0.4
THBS3P49746 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THBS3P49746 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THBS3P49746 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
THBS3P49746 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
THBS3P49746 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
THBS3P49746 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
THBS3P49746 AL137060.1-201ENST00000618151 2648 ntBASIC17.53■□□□□ 0.4
THBS3P49746 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
THBS3P49746 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
THBS3P49746 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
THBS3P49746 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
THBS3P49746 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
THBS3P49746 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms