Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN3P26045 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.79■■□□□ 1.08
PTPN3P26045 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PTPN3P26045 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN3P26045 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN3P26045 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN3P26045 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN3P26045 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN3P26045 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN3P26045 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PTPN3P26045 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.78■■□□□ 1.08
PTPN3P26045 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN3P26045 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.78■■□□□ 1.08
PTPN3P26045 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.78■■□□□ 1.08
PTPN3P26045 AC104564.3-201ENST00000582367 638 ntBASIC21.78■■□□□ 1.08
PTPN3P26045 AC026310.3-201ENST00000625186 2373 ntBASIC21.78■■□□□ 1.08
PTPN3P26045 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTPN3P26045 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
PTPN3P26045 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.78■■□□□ 1.08
PTPN3P26045 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN3P26045 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN3P26045 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN3P26045 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN3P26045 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
PTPN3P26045 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.77■■□□□ 1.08
PTPN3P26045 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTPN3P26045 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
PTPN3P26045 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PTPN3P26045 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.76■■□□□ 1.07
PTPN3P26045 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN3P26045 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN3P26045 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN3P26045 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN3P26045 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.76■■□□□ 1.07
PTPN3P26045 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.76■■□□□ 1.07
PTPN3P26045 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN3P26045 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN3P26045 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
PTPN3P26045 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN3P26045 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN3P26045 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN3P26045 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN3P26045 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN3P26045 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.75■■□□□ 1.07
PTPN3P26045 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN3P26045 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN3P26045 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.75■■□□□ 1.07
PTPN3P26045 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN3P26045 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN3P26045 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.75■■□□□ 1.07
PTPN3P26045 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN3P26045 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.75■■□□□ 1.07
PTPN3P26045 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.75■■□□□ 1.07
PTPN3P26045 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.75■■□□□ 1.07
PTPN3P26045 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.75■■□□□ 1.07
PTPN3P26045 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN3P26045 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.75■■□□□ 1.07
PTPN3P26045 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.75■■□□□ 1.07
PTPN3P26045 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN3P26045 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN3P26045 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN3P26045 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN3P26045 AC009237.3-201ENST00000393279 1427 ntBASIC21.74■■□□□ 1.07
PTPN3P26045 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN3P26045 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
PTPN3P26045 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN3P26045 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN3P26045 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PTPN3P26045 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.74■■□□□ 1.07
PTPN3P26045 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN3P26045 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.74■■□□□ 1.07
PTPN3P26045 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.74■■□□□ 1.07
PTPN3P26045 Z98882.1-201ENST00000622160 2253 ntBASIC21.74■■□□□ 1.07
PTPN3P26045 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN3P26045 BX005040.4-201ENST00000637145 1518 ntBASIC21.74■■□□□ 1.07
PTPN3P26045 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.74■■□□□ 1.07
PTPN3P26045 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN3P26045 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN3P26045 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN3P26045 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN3P26045 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN3P26045 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN3P26045 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN3P26045 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.73■■□□□ 1.07
PTPN3P26045 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN3P26045 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN3P26045 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.73■■□□□ 1.07
PTPN3P26045 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN3P26045 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN3P26045 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.73■■□□□ 1.07
PTPN3P26045 AC012414.1-201ENST00000556676 535 ntBASIC21.73■■□□□ 1.07
PTPN3P26045 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN3P26045 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN3P26045 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN3P26045 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.72■■□□□ 1.07
PTPN3P26045 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.72■■□□□ 1.07
PTPN3P26045 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN3P26045 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN3P26045 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.72■■□□□ 1.07
PTPN3P26045 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms