Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC26.5■■□□□ 1.83
KCNA3P22001 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
KCNA3P22001 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC26.5■■□□□ 1.83
KCNA3P22001 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
KCNA3P22001 AL139125.2-201ENST00000623134 1869 ntBASIC26.5■■□□□ 1.83
KCNA3P22001 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
KCNA3P22001 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
KCNA3P22001 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
KCNA3P22001 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
KCNA3P22001 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
KCNA3P22001 GXYLT1P3-201ENST00000453058 1193 ntBASIC26.49■■□□□ 1.83
KCNA3P22001 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC26.49■■□□□ 1.83
KCNA3P22001 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC26.49■■□□□ 1.83
KCNA3P22001 AL162412.1-201ENST00000567129 965 ntBASIC26.49■■□□□ 1.83
KCNA3P22001 MIR4497-201ENST00000583208 89 ntBASIC26.49■■□□□ 1.83
KCNA3P22001 AC073912.3-201ENST00000624414 853 ntBASIC26.49■■□□□ 1.83
KCNA3P22001 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
KCNA3P22001 AC004812.2-201ENST00000611079 2094 ntBASIC26.49■■□□□ 1.83
KCNA3P22001 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.49■■□□□ 1.83
KCNA3P22001 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
KCNA3P22001 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
KCNA3P22001 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC26.48■■□□□ 1.83
KCNA3P22001 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
KCNA3P22001 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
KCNA3P22001 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
KCNA3P22001 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
KCNA3P22001 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
KCNA3P22001 AC211429.1-201ENST00000415277 523 ntBASIC26.48■■□□□ 1.83
KCNA3P22001 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
KCNA3P22001 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC26.48■■□□□ 1.83
KCNA3P22001 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
KCNA3P22001 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC26.48■■□□□ 1.83
KCNA3P22001 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC26.48■■□□□ 1.83
KCNA3P22001 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC26.48■■□□□ 1.83
KCNA3P22001 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
KCNA3P22001 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.48■■□□□ 1.83
KCNA3P22001 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC26.48■■□□□ 1.83
KCNA3P22001 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
KCNA3P22001 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
KCNA3P22001 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
KCNA3P22001 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
KCNA3P22001 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
KCNA3P22001 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC26.47■■□□□ 1.83
KCNA3P22001 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
KCNA3P22001 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
KCNA3P22001 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC26.47■■□□□ 1.83
KCNA3P22001 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC26.47■■□□□ 1.83
KCNA3P22001 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC26.47■■□□□ 1.83
KCNA3P22001 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC26.47■■□□□ 1.83
KCNA3P22001 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC26.47■■□□□ 1.83
KCNA3P22001 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
KCNA3P22001 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.46■■□□□ 1.83
KCNA3P22001 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
KCNA3P22001 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
KCNA3P22001 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.46■■□□□ 1.83
KCNA3P22001 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
KCNA3P22001 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
KCNA3P22001 GATS-209ENST00000454084 1030 ntTSL 3 BASIC26.46■■□□□ 1.83
KCNA3P22001 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
KCNA3P22001 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
KCNA3P22001 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
KCNA3P22001 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.83
KCNA3P22001 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
KCNA3P22001 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.45■■□□□ 1.83
KCNA3P22001 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
KCNA3P22001 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC26.45■■□□□ 1.82
KCNA3P22001 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC26.45■■□□□ 1.82
KCNA3P22001 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC26.45■■□□□ 1.82
KCNA3P22001 AL591742.1-201ENST00000604433 565 ntBASIC26.45■■□□□ 1.82
KCNA3P22001 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC26.45■■□□□ 1.82
KCNA3P22001 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC26.45■■□□□ 1.82
KCNA3P22001 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
KCNA3P22001 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.45■■□□□ 1.82
KCNA3P22001 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.45■■□□□ 1.82
KCNA3P22001 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
KCNA3P22001 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
KCNA3P22001 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
KCNA3P22001 MAX-217ENST00000557277 728 ntTSL 3 BASIC26.44■■□□□ 1.82
KCNA3P22001 Z99916.2-201ENST00000604037 246 ntBASIC26.44■■□□□ 1.82
KCNA3P22001 AC010331.1-201ENST00000611423 582 ntBASIC26.44■■□□□ 1.82
KCNA3P22001 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
KCNA3P22001 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
KCNA3P22001 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
KCNA3P22001 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
KCNA3P22001 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.43■■□□□ 1.82
KCNA3P22001 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
KCNA3P22001 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
KCNA3P22001 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
KCNA3P22001 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC26.43■■□□□ 1.82
KCNA3P22001 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC26.43■■□□□ 1.82
KCNA3P22001 RBM17P2-201ENST00000616397 1405 ntBASIC26.43■■□□□ 1.82
KCNA3P22001 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
KCNA3P22001 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
KCNA3P22001 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC26.43■■□□□ 1.82
KCNA3P22001 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC26.43■■□□□ 1.82
KCNA3P22001 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC26.43■■□□□ 1.82
KCNA3P22001 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC26.43■■□□□ 1.82
KCNA3P22001 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC26.43■■□□□ 1.82
KCNA3P22001 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
KCNA3P22001 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms