Protein–RNA interactions for Protein: P19387

POLR2C, DNA-directed RNA polymerase II subunit RPB3, humanhuman

Predicted RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2CP19387 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2CP19387 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
POLR2CP19387 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2CP19387 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2CP19387 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2CP19387 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2CP19387 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2CP19387 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR2CP19387 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2CP19387 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2CP19387 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR2CP19387 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
POLR2CP19387 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR2CP19387 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
POLR2CP19387 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2CP19387 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2CP19387 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2CP19387 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.65■□□□□ 0.9
POLR2CP19387 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2CP19387 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2CP19387 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2CP19387 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR2CP19387 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.65■□□□□ 0.9
POLR2CP19387 AC092437.1-201ENST00000624794 1048 ntBASIC20.65■□□□□ 0.9
POLR2CP19387 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2CP19387 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.65■□□□□ 0.9
POLR2CP19387 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
POLR2CP19387 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.64■□□□□ 0.9
POLR2CP19387 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.64■□□□□ 0.9
POLR2CP19387 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLR2CP19387 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
POLR2CP19387 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.64■□□□□ 0.89
POLR2CP19387 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
POLR2CP19387 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.64■□□□□ 0.89
POLR2CP19387 AL137784.2-201ENST00000607332 1000 ntBASIC20.64■□□□□ 0.89
POLR2CP19387 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.64■□□□□ 0.89
POLR2CP19387 AC233723.2-201ENST00000623798 2106 ntBASIC20.64■□□□□ 0.89
POLR2CP19387 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
POLR2CP19387 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLR2CP19387 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.64■□□□□ 0.89
POLR2CP19387 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.64■□□□□ 0.89
POLR2CP19387 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
POLR2CP19387 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR2CP19387 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR2CP19387 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR2CP19387 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR2CP19387 AC092053.2-201ENST00000640557 1818 ntBASIC20.63■□□□□ 0.89
POLR2CP19387 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.63■□□□□ 0.89
POLR2CP19387 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.63■□□□□ 0.89
POLR2CP19387 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.63■□□□□ 0.89
POLR2CP19387 KRT19P1-201ENST00000405746 1186 ntBASIC20.63■□□□□ 0.89
POLR2CP19387 AC004911.1-201ENST00000416316 871 ntBASIC20.63■□□□□ 0.89
POLR2CP19387 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.63■□□□□ 0.89
POLR2CP19387 AC137761.2-201ENST00000561729 223 ntBASIC20.63■□□□□ 0.89
POLR2CP19387 AC145350.3-201ENST00000569033 163 ntBASIC20.63■□□□□ 0.89
POLR2CP19387 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR2CP19387 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR2CP19387 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
POLR2CP19387 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.62■□□□□ 0.89
POLR2CP19387 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.62■□□□□ 0.89
POLR2CP19387 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR2CP19387 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.62■□□□□ 0.89
POLR2CP19387 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
POLR2CP19387 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.62■□□□□ 0.89
POLR2CP19387 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.62■□□□□ 0.89
POLR2CP19387 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.62■□□□□ 0.89
POLR2CP19387 AC104187.1-201ENST00000607510 612 ntBASIC20.62■□□□□ 0.89
POLR2CP19387 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
POLR2CP19387 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
POLR2CP19387 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.61■□□□□ 0.89
POLR2CP19387 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2CP19387 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2CP19387 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2CP19387 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.61■□□□□ 0.89
POLR2CP19387 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.61■□□□□ 0.89
POLR2CP19387 AC016769.1-201ENST00000409132 1010 ntBASIC20.61■□□□□ 0.89
POLR2CP19387 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.61■□□□□ 0.89
POLR2CP19387 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.61■□□□□ 0.89
POLR2CP19387 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
POLR2CP19387 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2CP19387 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2CP19387 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2CP19387 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
POLR2CP19387 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2CP19387 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2CP19387 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR2CP19387 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR2CP19387 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR2CP19387 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR2CP19387 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
POLR2CP19387 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR2CP19387 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
POLR2CP19387 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
POLR2CP19387 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
POLR2CP19387 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
POLR2CP19387 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR2CP19387 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.6■□□□□ 0.89
POLR2CP19387 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
POLR2CP19387 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR2CP19387 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms