Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CAPN1P07384 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CAPN1P07384 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.94■□□□□ 0.94
CAPN1P07384 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CAPN1P07384 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CAPN1P07384 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CAPN1P07384 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.94■□□□□ 0.94
CAPN1P07384 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CAPN1P07384 AC079089.2-201ENST00000531211 1277 ntBASIC20.94■□□□□ 0.94
CAPN1P07384 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
CAPN1P07384 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.94■□□□□ 0.94
CAPN1P07384 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CAPN1P07384 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CAPN1P07384 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CAPN1P07384 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.94■□□□□ 0.94
CAPN1P07384 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.94■□□□□ 0.94
CAPN1P07384 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CAPN1P07384 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
CAPN1P07384 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.93■□□□□ 0.94
CAPN1P07384 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CAPN1P07384 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CAPN1P07384 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.93■□□□□ 0.94
CAPN1P07384 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CAPN1P07384 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CAPN1P07384 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CAPN1P07384 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CAPN1P07384 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CAPN1P07384 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.93■□□□□ 0.94
CAPN1P07384 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CAPN1P07384 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CAPN1P07384 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CAPN1P07384 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CAPN1P07384 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.92■□□□□ 0.94
CAPN1P07384 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
CAPN1P07384 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CAPN1P07384 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CAPN1P07384 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.92■□□□□ 0.94
CAPN1P07384 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CAPN1P07384 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CAPN1P07384 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CAPN1P07384 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.92■□□□□ 0.94
CAPN1P07384 AC026310.3-201ENST00000625186 2373 ntBASIC20.92■□□□□ 0.94
CAPN1P07384 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.91■□□□□ 0.94
CAPN1P07384 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN1P07384 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN1P07384 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN1P07384 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
CAPN1P07384 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN1P07384 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN1P07384 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN1P07384 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CAPN1P07384 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN1P07384 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN1P07384 MIR572-201ENST00000384983 95 ntBASIC20.91■□□□□ 0.94
CAPN1P07384 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN1P07384 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN1P07384 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CAPN1P07384 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.91■□□□□ 0.94
CAPN1P07384 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.91■□□□□ 0.94
CAPN1P07384 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.91■□□□□ 0.94
CAPN1P07384 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN1P07384 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.91■□□□□ 0.94
CAPN1P07384 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN1P07384 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.91■□□□□ 0.94
CAPN1P07384 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.91■□□□□ 0.94
CAPN1P07384 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.91■□□□□ 0.94
CAPN1P07384 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CAPN1P07384 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN1P07384 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN1P07384 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.9■□□□□ 0.94
CAPN1P07384 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN1P07384 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CAPN1P07384 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CAPN1P07384 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN1P07384 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN1P07384 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CAPN1P07384 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CAPN1P07384 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN1P07384 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CAPN1P07384 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CAPN1P07384 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN1P07384 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.9■□□□□ 0.94
CAPN1P07384 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
CAPN1P07384 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN1P07384 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.89■□□□□ 0.94
CAPN1P07384 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CAPN1P07384 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.89■□□□□ 0.94
CAPN1P07384 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CAPN1P07384 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.89■□□□□ 0.93
CAPN1P07384 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.89■□□□□ 0.93
CAPN1P07384 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CAPN1P07384 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CAPN1P07384 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CAPN1P07384 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.89■□□□□ 0.93
CAPN1P07384 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.89■□□□□ 0.93
CAPN1P07384 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.89■□□□□ 0.93
CAPN1P07384 AC068587.7-201ENST00000641602 218 ntBASIC20.89■□□□□ 0.93
CAPN1P07384 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CAPN1P07384 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CAPN1P07384 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms