Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.76■□□□□ 0.27
TRGV3P03979 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRGV3P03979 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TRGV3P03979 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.76■□□□□ 0.27
TRGV3P03979 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TRGV3P03979 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.76■□□□□ 0.27
TRGV3P03979 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.76■□□□□ 0.27
TRGV3P03979 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.76■□□□□ 0.27
TRGV3P03979 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
TRGV3P03979 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.76■□□□□ 0.27
TRGV3P03979 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.76■□□□□ 0.27
TRGV3P03979 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRGV3P03979 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.76■□□□□ 0.27
TRGV3P03979 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.76■□□□□ 0.27
TRGV3P03979 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRGV3P03979 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRGV3P03979 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRGV3P03979 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.75■□□□□ 0.27
TRGV3P03979 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRGV3P03979 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRGV3P03979 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRGV3P03979 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRGV3P03979 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRGV3P03979 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRGV3P03979 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRGV3P03979 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRGV3P03979 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.75■□□□□ 0.27
TRGV3P03979 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRGV3P03979 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRGV3P03979 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
TRGV3P03979 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.75■□□□□ 0.27
TRGV3P03979 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRGV3P03979 AC009237.3-201ENST00000393279 1427 ntBASIC16.75■□□□□ 0.27
TRGV3P03979 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRGV3P03979 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.75■□□□□ 0.27
TRGV3P03979 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRGV3P03979 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRGV3P03979 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRGV3P03979 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TRGV3P03979 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV3P03979 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRGV3P03979 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV3P03979 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.74■□□□□ 0.27
TRGV3P03979 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV3P03979 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV3P03979 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.74■□□□□ 0.27
TRGV3P03979 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRGV3P03979 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.74■□□□□ 0.27
TRGV3P03979 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.74■□□□□ 0.27
TRGV3P03979 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.74■□□□□ 0.27
TRGV3P03979 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV3P03979 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV3P03979 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV3P03979 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV3P03979 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV3P03979 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRGV3P03979 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV3P03979 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.73■□□□□ 0.27
TRGV3P03979 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRGV3P03979 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV3P03979 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRGV3P03979 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRGV3P03979 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV3P03979 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRGV3P03979 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV3P03979 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV3P03979 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV3P03979 AC027612.3-201ENST00000413684 1047 ntBASIC16.73■□□□□ 0.27
TRGV3P03979 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV3P03979 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.73■□□□□ 0.27
TRGV3P03979 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.73■□□□□ 0.27
TRGV3P03979 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV3P03979 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.73■□□□□ 0.27
TRGV3P03979 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV3P03979 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV3P03979 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
TRGV3P03979 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV3P03979 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV3P03979 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.72■□□□□ 0.27
TRGV3P03979 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV3P03979 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV3P03979 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRGV3P03979 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
TRGV3P03979 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV3P03979 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRGV3P03979 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV3P03979 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.72■□□□□ 0.27
TRGV3P03979 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.72■□□□□ 0.27
TRGV3P03979 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRGV3P03979 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.72■□□□□ 0.27
TRGV3P03979 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV3P03979 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV3P03979 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV3P03979 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.72■□□□□ 0.27
TRGV3P03979 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV3P03979 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
TRGV3P03979 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV3P03979 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV3P03979 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV3P03979 LINC00565-201ENST00000562710 2331 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms