Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CD4P01730 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CD4P01730 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.68■■□□□ 1.38
CD4P01730 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.68■■□□□ 1.38
CD4P01730 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.68■■□□□ 1.38
CD4P01730 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.68■■□□□ 1.38
CD4P01730 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CD4P01730 OR10C1-204ENST00000622521 1039 ntBASIC23.68■■□□□ 1.38
CD4P01730 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CD4P01730 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CD4P01730 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.67■■□□□ 1.38
CD4P01730 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
CD4P01730 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CD4P01730 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.67■■□□□ 1.38
CD4P01730 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.67■■□□□ 1.38
CD4P01730 AC092118.2-201ENST00000613495 667 ntBASIC23.67■■□□□ 1.38
CD4P01730 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.67■■□□□ 1.38
CD4P01730 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
CD4P01730 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.67■■□□□ 1.38
CD4P01730 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
CD4P01730 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CD4P01730 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CD4P01730 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CD4P01730 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.66■■□□□ 1.38
CD4P01730 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
CD4P01730 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CD4P01730 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CD4P01730 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.66■■□□□ 1.38
CD4P01730 AL512625.2-201ENST00000417533 625 ntBASIC23.66■■□□□ 1.38
CD4P01730 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.66■■□□□ 1.38
CD4P01730 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.66■■□□□ 1.38
CD4P01730 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CD4P01730 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.66■■□□□ 1.38
CD4P01730 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CD4P01730 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CD4P01730 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.65■■□□□ 1.38
CD4P01730 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
CD4P01730 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CD4P01730 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.65■■□□□ 1.38
CD4P01730 AC093787.1-201ENST00000450396 207 ntBASIC23.65■■□□□ 1.38
CD4P01730 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.65■■□□□ 1.38
CD4P01730 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.65■■□□□ 1.38
CD4P01730 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.65■■□□□ 1.38
CD4P01730 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CD4P01730 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.65■■□□□ 1.38
CD4P01730 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
CD4P01730 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
CD4P01730 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CD4P01730 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CD4P01730 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CD4P01730 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.64■■□□□ 1.37
CD4P01730 AC053503.5-201ENST00000601508 636 ntBASIC23.64■■□□□ 1.37
CD4P01730 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.64■■□□□ 1.37
CD4P01730 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
CD4P01730 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CD4P01730 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
CD4P01730 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.64■■□□□ 1.37
CD4P01730 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CD4P01730 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.63■■□□□ 1.37
CD4P01730 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.63■■□□□ 1.37
CD4P01730 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CD4P01730 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CD4P01730 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.63■■□□□ 1.37
CD4P01730 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC23.63■■□□□ 1.37
CD4P01730 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CD4P01730 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CD4P01730 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CD4P01730 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CD4P01730 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
CD4P01730 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.62■■□□□ 1.37
CD4P01730 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CD4P01730 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CD4P01730 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.62■■□□□ 1.37
CD4P01730 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CD4P01730 RPS2P52-201ENST00000469610 820 ntBASIC23.62■■□□□ 1.37
CD4P01730 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
CD4P01730 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.62■■□□□ 1.37
CD4P01730 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CD4P01730 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CD4P01730 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CD4P01730 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CD4P01730 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CD4P01730 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.61■■□□□ 1.37
CD4P01730 AC098590.1-201ENST00000468126 897 ntBASIC23.61■■□□□ 1.37
CD4P01730 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.61■■□□□ 1.37
CD4P01730 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.61■■□□□ 1.37
CD4P01730 AC016405.3-201ENST00000607710 860 ntBASIC23.61■■□□□ 1.37
CD4P01730 LINC01960-201ENST00000563759 1884 ntBASIC23.61■■□□□ 1.37
CD4P01730 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CD4P01730 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CD4P01730 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.61■■□□□ 1.37
CD4P01730 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
CD4P01730 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
CD4P01730 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CD4P01730 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CD4P01730 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
CD4P01730 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CD4P01730 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CD4P01730 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
CD4P01730 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms