Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE6O95741 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.93■□□□□ 0.94
CPNE6O95741 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE6O95741 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.93■□□□□ 0.94
CPNE6O95741 AC079140.4-201ENST00000507448 529 ntBASIC20.93■□□□□ 0.94
CPNE6O95741 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.93■□□□□ 0.94
CPNE6O95741 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE6O95741 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE6O95741 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
CPNE6O95741 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE6O95741 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE6O95741 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE6O95741 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE6O95741 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE6O95741 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.92■□□□□ 0.94
CPNE6O95741 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.92■□□□□ 0.94
CPNE6O95741 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.92■□□□□ 0.94
CPNE6O95741 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CPNE6O95741 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.92■□□□□ 0.94
CPNE6O95741 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE6O95741 AL137060.1-201ENST00000618151 2648 ntBASIC20.92■□□□□ 0.94
CPNE6O95741 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE6O95741 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE6O95741 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE6O95741 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE6O95741 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE6O95741 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.92■□□□□ 0.94
CPNE6O95741 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CPNE6O95741 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE6O95741 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE6O95741 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE6O95741 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CPNE6O95741 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE6O95741 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE6O95741 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE6O95741 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE6O95741 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.91■□□□□ 0.94
CPNE6O95741 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.91■□□□□ 0.94
CPNE6O95741 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.91■□□□□ 0.94
CPNE6O95741 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.91■□□□□ 0.94
CPNE6O95741 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE6O95741 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.91■□□□□ 0.94
CPNE6O95741 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CPNE6O95741 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CPNE6O95741 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE6O95741 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE6O95741 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE6O95741 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE6O95741 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE6O95741 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE6O95741 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE6O95741 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.9■□□□□ 0.94
CPNE6O95741 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE6O95741 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.9■□□□□ 0.94
CPNE6O95741 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE6O95741 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.9■□□□□ 0.94
CPNE6O95741 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.9■□□□□ 0.94
CPNE6O95741 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE6O95741 BID-214ENST00000617586 542 ntTSL 5 BASIC20.9■□□□□ 0.94
CPNE6O95741 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE6O95741 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE6O95741 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.9■□□□□ 0.94
CPNE6O95741 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.9■□□□□ 0.94
CPNE6O95741 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE6O95741 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CPNE6O95741 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CPNE6O95741 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CPNE6O95741 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.89■□□□□ 0.94
CPNE6O95741 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CPNE6O95741 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE6O95741 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE6O95741 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.89■□□□□ 0.93
CPNE6O95741 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.89■□□□□ 0.93
CPNE6O95741 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.89■□□□□ 0.93
CPNE6O95741 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.89■□□□□ 0.93
CPNE6O95741 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.89■□□□□ 0.93
CPNE6O95741 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.89■□□□□ 0.93
CPNE6O95741 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE6O95741 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE6O95741 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CPNE6O95741 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.88■□□□□ 0.93
CPNE6O95741 AC009237.3-201ENST00000393279 1427 ntBASIC20.88■□□□□ 0.93
CPNE6O95741 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CPNE6O95741 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
CPNE6O95741 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CPNE6O95741 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE6O95741 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE6O95741 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE6O95741 KRT18P11-201ENST00000435214 1283 ntBASIC20.88■□□□□ 0.93
CPNE6O95741 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CPNE6O95741 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.88■□□□□ 0.93
CPNE6O95741 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.88■□□□□ 0.93
CPNE6O95741 AC073111.5-205ENST00000641717 521 ntBASIC20.88■□□□□ 0.93
CPNE6O95741 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE6O95741 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE6O95741 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE6O95741 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CPNE6O95741 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE6O95741 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE6O95741 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms