Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.79■□□□□ 0.6
GMDSO60547 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.79■□□□□ 0.6
GMDSO60547 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
GMDSO60547 AC011298.3-201ENST00000615796 283 ntBASIC18.79■□□□□ 0.6
GMDSO60547 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
GMDSO60547 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.79■□□□□ 0.6
GMDSO60547 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
GMDSO60547 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.79■□□□□ 0.6
GMDSO60547 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GMDSO60547 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.79■□□□□ 0.6
GMDSO60547 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GMDSO60547 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GMDSO60547 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
GMDSO60547 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GMDSO60547 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GMDSO60547 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GMDSO60547 SERBP1P1-201ENST00000396021 1160 ntBASIC18.78■□□□□ 0.6
GMDSO60547 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.78■□□□□ 0.6
GMDSO60547 CA15P2-201ENST00000611168 834 ntBASIC18.78■□□□□ 0.6
GMDSO60547 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GMDSO60547 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GMDSO60547 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.78■□□□□ 0.6
GMDSO60547 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.78■□□□□ 0.6
GMDSO60547 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.78■□□□□ 0.6
GMDSO60547 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GMDSO60547 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GMDSO60547 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GMDSO60547 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
GMDSO60547 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
GMDSO60547 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
GMDSO60547 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GMDSO60547 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
GMDSO60547 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GMDSO60547 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.77■□□□□ 0.6
GMDSO60547 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GMDSO60547 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GMDSO60547 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GMDSO60547 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GMDSO60547 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
GMDSO60547 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GMDSO60547 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GMDSO60547 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GMDSO60547 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
GMDSO60547 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
GMDSO60547 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
GMDSO60547 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GMDSO60547 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GMDSO60547 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GMDSO60547 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GMDSO60547 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.76■□□□□ 0.59
GMDSO60547 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GMDSO60547 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.76■□□□□ 0.59
GMDSO60547 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GMDSO60547 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
GMDSO60547 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GMDSO60547 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.76■□□□□ 0.59
GMDSO60547 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.76■□□□□ 0.59
GMDSO60547 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GMDSO60547 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GMDSO60547 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GMDSO60547 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
GMDSO60547 AL157384.1-201ENST00000445995 2473 ntBASIC18.75■□□□□ 0.59
GMDSO60547 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GMDSO60547 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
GMDSO60547 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.75■□□□□ 0.59
GMDSO60547 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GMDSO60547 UNC93B3-201ENST00000308076 687 ntBASIC18.75■□□□□ 0.59
GMDSO60547 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
GMDSO60547 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
GMDSO60547 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GMDSO60547 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GMDSO60547 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
GMDSO60547 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.75■□□□□ 0.59
GMDSO60547 AC136469.2-201ENST00000623944 1028 ntBASIC18.75■□□□□ 0.59
GMDSO60547 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GMDSO60547 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GMDSO60547 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.75■□□□□ 0.59
GMDSO60547 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GMDSO60547 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GMDSO60547 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GMDSO60547 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
GMDSO60547 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
GMDSO60547 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GMDSO60547 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
GMDSO60547 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.74■□□□□ 0.59
GMDSO60547 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GMDSO60547 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GMDSO60547 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
GMDSO60547 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.74■□□□□ 0.59
GMDSO60547 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GMDSO60547 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GMDSO60547 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.74■□□□□ 0.59
GMDSO60547 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GMDSO60547 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GMDSO60547 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
GMDSO60547 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.74■□□□□ 0.59
GMDSO60547 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GMDSO60547 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.74■□□□□ 0.59
GMDSO60547 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GMDSO60547 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms