Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 AC004687.1-201ENST00000579003 1625 ntBASIC15.87■□□□□ 0.13
SNAI2O43623 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.87■□□□□ 0.13
SNAI2O43623 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNAI2O43623 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNAI2O43623 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNAI2O43623 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNAI2O43623 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC15.87■□□□□ 0.13
SNAI2O43623 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNAI2O43623 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC15.87■□□□□ 0.13
SNAI2O43623 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC15.87■□□□□ 0.13
SNAI2O43623 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNAI2O43623 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNAI2O43623 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNAI2O43623 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNAI2O43623 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNAI2O43623 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNAI2O43623 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SNAI2O43623 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC15.86■□□□□ 0.13
SNAI2O43623 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNAI2O43623 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SNAI2O43623 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNAI2O43623 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SNAI2O43623 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC15.86■□□□□ 0.13
SNAI2O43623 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC15.86■□□□□ 0.13
SNAI2O43623 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SNAI2O43623 Z98882.1-201ENST00000622160 2253 ntBASIC15.85■□□□□ 0.13
SNAI2O43623 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNAI2O43623 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
SNAI2O43623 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SNAI2O43623 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC15.85■□□□□ 0.13
SNAI2O43623 AL157384.1-201ENST00000445995 2473 ntBASIC15.85■□□□□ 0.13
SNAI2O43623 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNAI2O43623 TSPY13P-201ENST00000338964 914 ntBASIC15.85■□□□□ 0.13
SNAI2O43623 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC15.85■□□□□ 0.13
SNAI2O43623 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SNAI2O43623 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC15.85■□□□□ 0.13
SNAI2O43623 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC15.85■□□□□ 0.13
SNAI2O43623 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC15.85■□□□□ 0.13
SNAI2O43623 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SNAI2O43623 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNAI2O43623 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNAI2O43623 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.85■□□□□ 0.13
SNAI2O43623 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SNAI2O43623 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SNAI2O43623 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
SNAI2O43623 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.85■□□□□ 0.13
SNAI2O43623 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SNAI2O43623 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNAI2O43623 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SNAI2O43623 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNAI2O43623 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
SNAI2O43623 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNAI2O43623 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNAI2O43623 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.84■□□□□ 0.13
SNAI2O43623 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNAI2O43623 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.84■□□□□ 0.13
SNAI2O43623 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNAI2O43623 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
SNAI2O43623 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SNAI2O43623 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNAI2O43623 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNAI2O43623 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC15.84■□□□□ 0.13
SNAI2O43623 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC15.84■□□□□ 0.13
SNAI2O43623 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC15.84■□□□□ 0.13
SNAI2O43623 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.84■□□□□ 0.13
SNAI2O43623 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.84■□□□□ 0.13
SNAI2O43623 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNAI2O43623 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNAI2O43623 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNAI2O43623 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNAI2O43623 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNAI2O43623 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNAI2O43623 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.84■□□□□ 0.13
SNAI2O43623 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SNAI2O43623 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNAI2O43623 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SNAI2O43623 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SNAI2O43623 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SNAI2O43623 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SNAI2O43623 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SNAI2O43623 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNAI2O43623 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SNAI2O43623 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNAI2O43623 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNAI2O43623 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNAI2O43623 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15.83■□□□□ 0.12
SNAI2O43623 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15.83■□□□□ 0.12
SNAI2O43623 TK2-216ENST00000564917 1156 ntTSL 3 BASIC15.83■□□□□ 0.12
SNAI2O43623 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNAI2O43623 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNAI2O43623 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SNAI2O43623 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SNAI2O43623 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNAI2O43623 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNAI2O43623 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNAI2O43623 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNAI2O43623 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
SNAI2O43623 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SNAI2O43623 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNAI2O43623 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms