Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ABCC4O15439 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC27.33■■□□□ 1.97
ABCC4O15439 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
ABCC4O15439 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC27.33■■□□□ 1.97
ABCC4O15439 COX20-201ENST00000366528 568 ntTSL 2 BASIC27.33■■□□□ 1.97
ABCC4O15439 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC27.33■■□□□ 1.97
ABCC4O15439 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ABCC4O15439 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ABCC4O15439 CDCA4P2-201ENST00000441182 718 ntBASIC27.33■■□□□ 1.97
ABCC4O15439 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ABCC4O15439 DBI-210ENST00000542275 757 ntTSL 5 BASIC27.33■■□□□ 1.97
ABCC4O15439 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC27.33■■□□□ 1.97
ABCC4O15439 AC073111.5-205ENST00000641717 521 ntBASIC27.33■■□□□ 1.97
ABCC4O15439 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ABCC4O15439 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ABCC4O15439 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
ABCC4O15439 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ABCC4O15439 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ABCC4O15439 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
ABCC4O15439 HSCB-202ENST00000398941 955 ntTSL 2 BASIC27.32■■□□□ 1.96
ABCC4O15439 AC016769.1-201ENST00000409132 1010 ntBASIC27.32■■□□□ 1.96
ABCC4O15439 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC27.32■■□□□ 1.96
ABCC4O15439 TK2-208ENST00000545043 1120 ntTSL 2 BASIC27.32■■□□□ 1.96
ABCC4O15439 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
ABCC4O15439 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
ABCC4O15439 BX005040.4-201ENST00000637145 1518 ntBASIC27.31■■□□□ 1.96
ABCC4O15439 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
ABCC4O15439 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
ABCC4O15439 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
ABCC4O15439 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC27.31■■□□□ 1.96
ABCC4O15439 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC27.31■■□□□ 1.96
ABCC4O15439 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC27.31■■□□□ 1.96
ABCC4O15439 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC27.31■■□□□ 1.96
ABCC4O15439 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC27.31■■□□□ 1.96
ABCC4O15439 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
ABCC4O15439 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
ABCC4O15439 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
ABCC4O15439 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ABCC4O15439 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC27.3■■□□□ 1.96
ABCC4O15439 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
ABCC4O15439 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC27.3■■□□□ 1.96
ABCC4O15439 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
ABCC4O15439 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
ABCC4O15439 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC27.29■■□□□ 1.96
ABCC4O15439 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
ABCC4O15439 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ABCC4O15439 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ABCC4O15439 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ABCC4O15439 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ABCC4O15439 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ABCC4O15439 AC026471.6-201ENST00000622954 1905 ntBASIC27.28■■□□□ 1.96
ABCC4O15439 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ABCC4O15439 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
ABCC4O15439 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ABCC4O15439 ASL-203ENST00000380839 1765 ntTSL 5 BASIC27.28■■□□□ 1.96
ABCC4O15439 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
ABCC4O15439 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
ABCC4O15439 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC27.28■■□□□ 1.96
ABCC4O15439 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC27.28■■□□□ 1.96
ABCC4O15439 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ABCC4O15439 AP004607.7-201ENST00000527152 1677 ntBASIC27.28■■□□□ 1.96
ABCC4O15439 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ABCC4O15439 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ABCC4O15439 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ABCC4O15439 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
ABCC4O15439 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
ABCC4O15439 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ABCC4O15439 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC27.27■■□□□ 1.96
ABCC4O15439 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
ABCC4O15439 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC27.27■■□□□ 1.96
ABCC4O15439 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
ABCC4O15439 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
ABCC4O15439 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ABCC4O15439 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ABCC4O15439 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
ABCC4O15439 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC27.26■■□□□ 1.95
ABCC4O15439 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ABCC4O15439 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC27.26■■□□□ 1.95
ABCC4O15439 AL034346.1-201ENST00000568244 1277 ntBASIC27.26■■□□□ 1.95
ABCC4O15439 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC27.26■■□□□ 1.95
ABCC4O15439 GXYLT1P5-201ENST00000614548 1189 ntBASIC27.26■■□□□ 1.95
ABCC4O15439 GAS2L1P2-201ENST00000436355 1356 ntBASIC27.26■■□□□ 1.95
ABCC4O15439 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC27.26■■□□□ 1.95
ABCC4O15439 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
ABCC4O15439 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ABCC4O15439 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ABCC4O15439 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ABCC4O15439 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
ABCC4O15439 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC27.25■■□□□ 1.95
ABCC4O15439 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ABCC4O15439 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ABCC4O15439 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ABCC4O15439 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ABCC4O15439 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ABCC4O15439 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ABCC4O15439 LINC00565-201ENST00000562710 2331 ntBASIC27.24■■□□□ 1.95
ABCC4O15439 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC27.24■■□□□ 1.95
ABCC4O15439 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
ABCC4O15439 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC27.24■■□□□ 1.95
ABCC4O15439 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms