Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA4O00483 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA4O00483 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA4O00483 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA4O00483 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
NDUFA4O00483 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA4O00483 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA4O00483 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA4O00483 AC105265.2-201ENST00000467189 838 ntBASIC16.39■□□□□ 0.21
NDUFA4O00483 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
NDUFA4O00483 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.39■□□□□ 0.21
NDUFA4O00483 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
NDUFA4O00483 AC244015.2-201ENST00000616358 1861 ntBASIC16.39■□□□□ 0.21
NDUFA4O00483 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA4O00483 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA4O00483 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.38■□□□□ 0.21
NDUFA4O00483 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA4O00483 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA4O00483 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA4O00483 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NDUFA4O00483 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA4O00483 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.38■□□□□ 0.21
NDUFA4O00483 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.38■□□□□ 0.21
NDUFA4O00483 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA4O00483 IRS3P-201ENST00000223076 1006 ntBASIC16.38■□□□□ 0.21
NDUFA4O00483 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA4O00483 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.38■□□□□ 0.21
NDUFA4O00483 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.38■□□□□ 0.21
NDUFA4O00483 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.38■□□□□ 0.21
NDUFA4O00483 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.38■□□□□ 0.21
NDUFA4O00483 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA4O00483 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NDUFA4O00483 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA4O00483 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA4O00483 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.38■□□□□ 0.21
NDUFA4O00483 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NDUFA4O00483 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.38■□□□□ 0.21
NDUFA4O00483 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA4O00483 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA4O00483 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.38■□□□□ 0.21
NDUFA4O00483 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA4O00483 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA4O00483 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.37■□□□□ 0.21
NDUFA4O00483 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA4O00483 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA4O00483 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA4O00483 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA4O00483 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.37■□□□□ 0.21
NDUFA4O00483 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.37■□□□□ 0.21
NDUFA4O00483 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.37■□□□□ 0.21
NDUFA4O00483 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.37■□□□□ 0.21
NDUFA4O00483 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.37■□□□□ 0.21
NDUFA4O00483 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA4O00483 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA4O00483 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA4O00483 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.37■□□□□ 0.21
NDUFA4O00483 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.37■□□□□ 0.21
NDUFA4O00483 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NDUFA4O00483 AC026471.6-201ENST00000622954 1905 ntBASIC16.37■□□□□ 0.21
NDUFA4O00483 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.36■□□□□ 0.21
NDUFA4O00483 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
NDUFA4O00483 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.36■□□□□ 0.21
NDUFA4O00483 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA4O00483 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA4O00483 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
NDUFA4O00483 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA4O00483 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.36■□□□□ 0.21
NDUFA4O00483 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA4O00483 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA4O00483 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA4O00483 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA4O00483 AC005224.4-201ENST00000583262 1652 ntBASIC16.36■□□□□ 0.21
NDUFA4O00483 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
NDUFA4O00483 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NDUFA4O00483 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.36■□□□□ 0.21
NDUFA4O00483 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.36■□□□□ 0.21
NDUFA4O00483 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA4O00483 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA4O00483 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA4O00483 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA4O00483 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA4O00483 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA4O00483 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.35■□□□□ 0.21
NDUFA4O00483 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.35■□□□□ 0.21
NDUFA4O00483 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
NDUFA4O00483 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.35■□□□□ 0.21
NDUFA4O00483 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.35■□□□□ 0.21
NDUFA4O00483 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA4O00483 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA4O00483 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NDUFA4O00483 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA4O00483 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NDUFA4O00483 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
NDUFA4O00483 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NDUFA4O00483 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.34■□□□□ 0.21
NDUFA4O00483 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDUFA4O00483 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NDUFA4O00483 AC003102.1-202ENST00000563394 1796 ntBASIC16.34■□□□□ 0.21
NDUFA4O00483 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.34■□□□□ 0.21
NDUFA4O00483 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms