Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CLIC1O00299 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC1O00299 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.1■□□□□ 0.81
CLIC1O00299 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLIC1O00299 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.1■□□□□ 0.81
CLIC1O00299 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CLIC1O00299 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CLIC1O00299 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.09■□□□□ 0.81
CLIC1O00299 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.09■□□□□ 0.81
CLIC1O00299 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLIC1O00299 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.09■□□□□ 0.81
CLIC1O00299 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.09■□□□□ 0.81
CLIC1O00299 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLIC1O00299 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.09■□□□□ 0.81
CLIC1O00299 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLIC1O00299 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CLIC1O00299 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC1O00299 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.08■□□□□ 0.81
CLIC1O00299 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.08■□□□□ 0.81
CLIC1O00299 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.08■□□□□ 0.81
CLIC1O00299 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.08■□□□□ 0.81
CLIC1O00299 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC1O00299 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC1O00299 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC1O00299 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLIC1O00299 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.08■□□□□ 0.81
CLIC1O00299 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CLIC1O00299 AL034346.1-201ENST00000568244 1277 ntBASIC20.08■□□□□ 0.81
CLIC1O00299 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.08■□□□□ 0.81
CLIC1O00299 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLIC1O00299 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.08■□□□□ 0.8
CLIC1O00299 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.08■□□□□ 0.8
CLIC1O00299 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLIC1O00299 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLIC1O00299 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLIC1O00299 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLIC1O00299 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLIC1O00299 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
CLIC1O00299 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLIC1O00299 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.08■□□□□ 0.8
CLIC1O00299 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLIC1O00299 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.08■□□□□ 0.8
CLIC1O00299 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLIC1O00299 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC1O00299 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC1O00299 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC1O00299 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.07■□□□□ 0.8
CLIC1O00299 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.07■□□□□ 0.8
CLIC1O00299 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
CLIC1O00299 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.07■□□□□ 0.8
CLIC1O00299 AL138724.1-201ENST00000606771 1088 ntBASIC20.07■□□□□ 0.8
CLIC1O00299 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CLIC1O00299 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CLIC1O00299 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC1O00299 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.07■□□□□ 0.8
CLIC1O00299 SYT6-210ENST00000641643 1587 ntBASIC20.07■□□□□ 0.8
CLIC1O00299 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CLIC1O00299 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC1O00299 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.07■□□□□ 0.8
CLIC1O00299 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC1O00299 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLIC1O00299 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC1O00299 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CLIC1O00299 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC1O00299 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC1O00299 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC1O00299 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC1O00299 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC1O00299 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC1O00299 SERBP1P1-201ENST00000396021 1160 ntBASIC20.06■□□□□ 0.8
CLIC1O00299 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CLIC1O00299 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC1O00299 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC1O00299 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLIC1O00299 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.06■□□□□ 0.8
CLIC1O00299 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CLIC1O00299 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CLIC1O00299 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC1O00299 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC1O00299 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC1O00299 DUX4L19-201ENST00000557448 1267 ntBASIC20.05■□□□□ 0.8
CLIC1O00299 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CLIC1O00299 AP004607.7-201ENST00000527152 1677 ntBASIC20.05■□□□□ 0.8
CLIC1O00299 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLIC1O00299 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.05■□□□□ 0.8
CLIC1O00299 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CLIC1O00299 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CLIC1O00299 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
CLIC1O00299 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CLIC1O00299 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLIC1O00299 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.04■□□□□ 0.8
CLIC1O00299 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.04■□□□□ 0.8
CLIC1O00299 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC1O00299 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC1O00299 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CLIC1O00299 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC1O00299 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.04■□□□□ 0.8
CLIC1O00299 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLIC1O00299 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLIC1O00299 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms