Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRRM4A7MD48 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.18■□□□□ 0.34
SRRM4A7MD48 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRRM4A7MD48 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRRM4A7MD48 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.17■□□□□ 0.34
SRRM4A7MD48 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM4A7MD48 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM4A7MD48 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM4A7MD48 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM4A7MD48 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM4A7MD48 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.17■□□□□ 0.34
SRRM4A7MD48 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.17■□□□□ 0.34
SRRM4A7MD48 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM4A7MD48 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM4A7MD48 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM4A7MD48 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.17■□□□□ 0.34
SRRM4A7MD48 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.17■□□□□ 0.34
SRRM4A7MD48 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SRRM4A7MD48 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.17■□□□□ 0.34
SRRM4A7MD48 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.17■□□□□ 0.34
SRRM4A7MD48 AL034346.1-201ENST00000568244 1277 ntBASIC17.17■□□□□ 0.34
SRRM4A7MD48 AC126544.1-201ENST00000580842 1059 ntBASIC17.17■□□□□ 0.34
SRRM4A7MD48 AC104564.3-201ENST00000582367 638 ntBASIC17.17■□□□□ 0.34
SRRM4A7MD48 SMUG1P1-201ENST00000590640 811 ntBASIC17.17■□□□□ 0.34
SRRM4A7MD48 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.17■□□□□ 0.34
SRRM4A7MD48 AC008764.7-201ENST00000593779 1081 ntBASIC17.17■□□□□ 0.34
SRRM4A7MD48 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM4A7MD48 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.17■□□□□ 0.34
SRRM4A7MD48 AC003102.1-202ENST00000563394 1796 ntBASIC17.17■□□□□ 0.34
SRRM4A7MD48 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM4A7MD48 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SRRM4A7MD48 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.17■□□□□ 0.34
SRRM4A7MD48 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM4A7MD48 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM4A7MD48 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.16■□□□□ 0.34
SRRM4A7MD48 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM4A7MD48 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM4A7MD48 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM4A7MD48 AF106564.1-201ENST00000607058 2553 ntBASIC17.16■□□□□ 0.34
SRRM4A7MD48 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM4A7MD48 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM4A7MD48 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM4A7MD48 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.16■□□□□ 0.34
SRRM4A7MD48 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.16■□□□□ 0.34
SRRM4A7MD48 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.16■□□□□ 0.34
SRRM4A7MD48 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM4A7MD48 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM4A7MD48 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM4A7MD48 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.16■□□□□ 0.34
SRRM4A7MD48 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM4A7MD48 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SRRM4A7MD48 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.16■□□□□ 0.34
SRRM4A7MD48 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM4A7MD48 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SRRM4A7MD48 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM4A7MD48 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.15■□□□□ 0.34
SRRM4A7MD48 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.15■□□□□ 0.34
SRRM4A7MD48 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM4A7MD48 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM4A7MD48 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.15■□□□□ 0.34
SRRM4A7MD48 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SRRM4A7MD48 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM4A7MD48 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.15■□□□□ 0.34
SRRM4A7MD48 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.15■□□□□ 0.34
SRRM4A7MD48 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SRRM4A7MD48 AC106739.1-201ENST00000617035 715 ntBASIC17.15■□□□□ 0.34
SRRM4A7MD48 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.15■□□□□ 0.34
SRRM4A7MD48 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM4A7MD48 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM4A7MD48 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM4A7MD48 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.15■□□□□ 0.34
SRRM4A7MD48 FEM1AP4-201ENST00000443167 1987 ntBASIC17.15■□□□□ 0.34
SRRM4A7MD48 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM4A7MD48 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM4A7MD48 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM4A7MD48 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM4A7MD48 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM4A7MD48 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.14■□□□□ 0.33
SRRM4A7MD48 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.14■□□□□ 0.33
SRRM4A7MD48 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM4A7MD48 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.14■□□□□ 0.33
SRRM4A7MD48 IGHV3-19-201ENST00000521488 291 ntBASIC17.14■□□□□ 0.33
SRRM4A7MD48 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
SRRM4A7MD48 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.14■□□□□ 0.33
SRRM4A7MD48 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SRRM4A7MD48 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM4A7MD48 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM4A7MD48 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM4A7MD48 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM4A7MD48 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM4A7MD48 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM4A7MD48 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM4A7MD48 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM4A7MD48 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM4A7MD48 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM4A7MD48 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.13■□□□□ 0.33
SRRM4A7MD48 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.13■□□□□ 0.33
SRRM4A7MD48 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.13■□□□□ 0.33
SRRM4A7MD48 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM4A7MD48 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms