Protein–RNA interactions for Protein: A6NKX1

FAM223B, Protein FAM223B, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM223BA6NKX1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FAM223BA6NKX1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.61■□□□□ 0.25
FAM223BA6NKX1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM223BA6NKX1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
FAM223BA6NKX1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
FAM223BA6NKX1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM223BA6NKX1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM223BA6NKX1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.61■□□□□ 0.25
FAM223BA6NKX1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.61■□□□□ 0.25
FAM223BA6NKX1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.61■□□□□ 0.25
FAM223BA6NKX1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM223BA6NKX1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM223BA6NKX1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FAM223BA6NKX1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM223BA6NKX1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM223BA6NKX1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM223BA6NKX1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FAM223BA6NKX1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM223BA6NKX1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM223BA6NKX1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
FAM223BA6NKX1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM223BA6NKX1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.6■□□□□ 0.25
FAM223BA6NKX1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.6■□□□□ 0.25
FAM223BA6NKX1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.6■□□□□ 0.25
FAM223BA6NKX1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
FAM223BA6NKX1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
FAM223BA6NKX1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM223BA6NKX1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM223BA6NKX1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
FAM223BA6NKX1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.6■□□□□ 0.25
FAM223BA6NKX1 MIR6084-201ENST00000622012 110 ntBASIC16.6■□□□□ 0.25
FAM223BA6NKX1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM223BA6NKX1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.6■□□□□ 0.25
FAM223BA6NKX1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM223BA6NKX1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM223BA6NKX1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
FAM223BA6NKX1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
FAM223BA6NKX1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
FAM223BA6NKX1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.6■□□□□ 0.25
FAM223BA6NKX1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FAM223BA6NKX1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
FAM223BA6NKX1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FAM223BA6NKX1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
FAM223BA6NKX1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.59■□□□□ 0.25
FAM223BA6NKX1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM223BA6NKX1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM223BA6NKX1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.59■□□□□ 0.25
FAM223BA6NKX1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM223BA6NKX1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.59■□□□□ 0.25
FAM223BA6NKX1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.59■□□□□ 0.25
FAM223BA6NKX1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.59■□□□□ 0.25
FAM223BA6NKX1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.59■□□□□ 0.25
FAM223BA6NKX1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
FAM223BA6NKX1 TPRG1LP1-201ENST00000598702 760 ntBASIC16.59■□□□□ 0.25
FAM223BA6NKX1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM223BA6NKX1 AC055733.4-201ENST00000638462 1354 ntBASIC16.59■□□□□ 0.25
FAM223BA6NKX1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FAM223BA6NKX1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
FAM223BA6NKX1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
FAM223BA6NKX1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.59■□□□□ 0.25
FAM223BA6NKX1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FAM223BA6NKX1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.59■□□□□ 0.25
FAM223BA6NKX1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM223BA6NKX1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FAM223BA6NKX1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
FAM223BA6NKX1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
FAM223BA6NKX1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.58■□□□□ 0.25
FAM223BA6NKX1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FAM223BA6NKX1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
FAM223BA6NKX1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FAM223BA6NKX1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.58■□□□□ 0.24
FAM223BA6NKX1 ZNRF2P3-201ENST00000424200 374 ntBASIC16.58■□□□□ 0.24
FAM223BA6NKX1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FAM223BA6NKX1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
FAM223BA6NKX1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FAM223BA6NKX1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FAM223BA6NKX1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.58■□□□□ 0.24
FAM223BA6NKX1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.58■□□□□ 0.24
FAM223BA6NKX1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
FAM223BA6NKX1 LINC02228-203ENST00000641970 1355 ntBASIC16.58■□□□□ 0.24
FAM223BA6NKX1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
FAM223BA6NKX1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.58■□□□□ 0.24
FAM223BA6NKX1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FAM223BA6NKX1 AC010542.4-201ENST00000563151 1910 ntBASIC16.58■□□□□ 0.24
FAM223BA6NKX1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FAM223BA6NKX1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
FAM223BA6NKX1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FAM223BA6NKX1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FAM223BA6NKX1 LINC00565-201ENST00000562710 2331 ntBASIC16.58■□□□□ 0.24
FAM223BA6NKX1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
FAM223BA6NKX1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
FAM223BA6NKX1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM223BA6NKX1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
FAM223BA6NKX1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.57■□□□□ 0.24
FAM223BA6NKX1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FAM223BA6NKX1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.57■□□□□ 0.24
FAM223BA6NKX1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.57■□□□□ 0.24
FAM223BA6NKX1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.57■□□□□ 0.24
FAM223BA6NKX1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.57■□□□□ 0.24
FAM223BA6NKX1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms