Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 GCSHP5-201ENST00000443090 522 ntBASIC33.24■■■□□ 2.91
PLEKHD1A6NEE1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC33.24■■■□□ 2.91
PLEKHD1A6NEE1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC33.24■■■□□ 2.91
PLEKHD1A6NEE1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC33.24■■■□□ 2.91
PLEKHD1A6NEE1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC33.24■■■□□ 2.91
PLEKHD1A6NEE1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
PLEKHD1A6NEE1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
PLEKHD1A6NEE1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
PLEKHD1A6NEE1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC33.23■■■□□ 2.91
PLEKHD1A6NEE1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
PLEKHD1A6NEE1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC33.23■■■□□ 2.91
PLEKHD1A6NEE1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC33.23■■■□□ 2.91
PLEKHD1A6NEE1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
PLEKHD1A6NEE1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
PLEKHD1A6NEE1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC33.22■■■□□ 2.91
PLEKHD1A6NEE1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC33.22■■■□□ 2.91
PLEKHD1A6NEE1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
PLEKHD1A6NEE1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC33.22■■■□□ 2.91
PLEKHD1A6NEE1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
PLEKHD1A6NEE1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
PLEKHD1A6NEE1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC33.21■■■□□ 2.91
PLEKHD1A6NEE1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
PLEKHD1A6NEE1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
PLEKHD1A6NEE1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
PLEKHD1A6NEE1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC33.21■■■□□ 2.91
PLEKHD1A6NEE1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
PLEKHD1A6NEE1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC33.21■■■□□ 2.91
PLEKHD1A6NEE1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC33.21■■■□□ 2.91
PLEKHD1A6NEE1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC33.21■■■□□ 2.91
PLEKHD1A6NEE1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC33.21■■■□□ 2.91
PLEKHD1A6NEE1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC33.21■■■□□ 2.91
PLEKHD1A6NEE1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC33.2■■■□□ 2.91
PLEKHD1A6NEE1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
PLEKHD1A6NEE1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
PLEKHD1A6NEE1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
PLEKHD1A6NEE1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC33.2■■■□□ 2.91
PLEKHD1A6NEE1 AC091874.3-201ENST00000512672 1195 ntBASIC33.2■■■□□ 2.91
PLEKHD1A6NEE1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC33.2■■■□□ 2.91
PLEKHD1A6NEE1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC33.2■■■□□ 2.91
PLEKHD1A6NEE1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC33.2■■■□□ 2.91
PLEKHD1A6NEE1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC33.2■■■□□ 2.91
PLEKHD1A6NEE1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
PLEKHD1A6NEE1 AP006294.2-201ENST00000641667 209 ntBASIC33.2■■■□□ 2.91
PLEKHD1A6NEE1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC33.2■■■□□ 2.91
PLEKHD1A6NEE1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC33.19■■■□□ 2.9
PLEKHD1A6NEE1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC33.19■■■□□ 2.9
PLEKHD1A6NEE1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
PLEKHD1A6NEE1 AC008175.2-201ENST00000612840 297 ntBASIC33.19■■■□□ 2.9
PLEKHD1A6NEE1 AC120498.10-201ENST00000621827 505 ntBASIC33.19■■■□□ 2.9
PLEKHD1A6NEE1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC33.18■■■□□ 2.9
PLEKHD1A6NEE1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC33.18■■■□□ 2.9
PLEKHD1A6NEE1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
PLEKHD1A6NEE1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC33.18■■■□□ 2.9
PLEKHD1A6NEE1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
PLEKHD1A6NEE1 AL162412.1-201ENST00000567129 965 ntBASIC33.18■■■□□ 2.9
PLEKHD1A6NEE1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
PLEKHD1A6NEE1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
PLEKHD1A6NEE1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
PLEKHD1A6NEE1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
PLEKHD1A6NEE1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC33.17■■■□□ 2.9
PLEKHD1A6NEE1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC33.17■■■□□ 2.9
PLEKHD1A6NEE1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
PLEKHD1A6NEE1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC33.16■■■□□ 2.9
PLEKHD1A6NEE1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC33.16■■■□□ 2.9
PLEKHD1A6NEE1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC33.16■■■□□ 2.9
PLEKHD1A6NEE1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC33.16■■■□□ 2.9
PLEKHD1A6NEE1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC33.16■■■□□ 2.9
PLEKHD1A6NEE1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC33.16■■■□□ 2.9
PLEKHD1A6NEE1 AC010980.2-201ENST00000587099 1412 ntBASIC33.16■■■□□ 2.9
PLEKHD1A6NEE1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
PLEKHD1A6NEE1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
PLEKHD1A6NEE1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
PLEKHD1A6NEE1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC33.15■■■□□ 2.9
PLEKHD1A6NEE1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC33.15■■■□□ 2.9
PLEKHD1A6NEE1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
PLEKHD1A6NEE1 POU5F1P4-201ENST00000413175 1085 ntBASIC33.15■■■□□ 2.9
PLEKHD1A6NEE1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
PLEKHD1A6NEE1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC33.15■■■□□ 2.9
PLEKHD1A6NEE1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC33.15■■■□□ 2.9
PLEKHD1A6NEE1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC33.15■■■□□ 2.9
PLEKHD1A6NEE1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
PLEKHD1A6NEE1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC33.15■■■□□ 2.9
PLEKHD1A6NEE1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC33.15■■■□□ 2.9
PLEKHD1A6NEE1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
PLEKHD1A6NEE1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC33.14■■■□□ 2.9
PLEKHD1A6NEE1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
PLEKHD1A6NEE1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC33.14■■■□□ 2.9
PLEKHD1A6NEE1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC33.14■■■□□ 2.9
PLEKHD1A6NEE1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
PLEKHD1A6NEE1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC33.14■■■□□ 2.9
PLEKHD1A6NEE1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC33.14■■■□□ 2.9
PLEKHD1A6NEE1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
PLEKHD1A6NEE1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.89
PLEKHD1A6NEE1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC33.14■■■□□ 2.89
PLEKHD1A6NEE1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC33.13■■■□□ 2.89
PLEKHD1A6NEE1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
PLEKHD1A6NEE1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
PLEKHD1A6NEE1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
PLEKHD1A6NEE1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC33.13■■■□□ 2.89
PLEKHD1A6NEE1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC33.13■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms