Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM49BA6NDI0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM49BA6NDI0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM49BA6NDI0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM49BA6NDI0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM49BA6NDI0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
TRIM49BA6NDI0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM49BA6NDI0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.53■■□□□ 1.36
TRIM49BA6NDI0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM49BA6NDI0 AC104564.3-201ENST00000582367 638 ntBASIC23.53■■□□□ 1.36
TRIM49BA6NDI0 SMUG1P1-201ENST00000590640 811 ntBASIC23.53■■□□□ 1.36
TRIM49BA6NDI0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
TRIM49BA6NDI0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM49BA6NDI0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM49BA6NDI0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM49BA6NDI0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
TRIM49BA6NDI0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM49BA6NDI0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM49BA6NDI0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM49BA6NDI0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM49BA6NDI0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
TRIM49BA6NDI0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM49BA6NDI0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM49BA6NDI0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM49BA6NDI0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM49BA6NDI0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM49BA6NDI0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.52■■□□□ 1.36
TRIM49BA6NDI0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.52■■□□□ 1.36
TRIM49BA6NDI0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM49BA6NDI0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.52■■□□□ 1.36
TRIM49BA6NDI0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.52■■□□□ 1.36
TRIM49BA6NDI0 AL024507.2-201ENST00000606070 2574 ntBASIC23.52■■□□□ 1.36
TRIM49BA6NDI0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM49BA6NDI0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM49BA6NDI0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM49BA6NDI0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM49BA6NDI0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM49BA6NDI0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM49BA6NDI0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM49BA6NDI0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.51■■□□□ 1.35
TRIM49BA6NDI0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM49BA6NDI0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM49BA6NDI0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM49BA6NDI0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.51■■□□□ 1.35
TRIM49BA6NDI0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
TRIM49BA6NDI0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM49BA6NDI0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM49BA6NDI0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.51■■□□□ 1.35
TRIM49BA6NDI0 AL034346.1-201ENST00000568244 1277 ntBASIC23.51■■□□□ 1.35
TRIM49BA6NDI0 AC126544.1-201ENST00000580842 1059 ntBASIC23.51■■□□□ 1.35
TRIM49BA6NDI0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.51■■□□□ 1.35
TRIM49BA6NDI0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM49BA6NDI0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
TRIM49BA6NDI0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.51■■□□□ 1.35
TRIM49BA6NDI0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM49BA6NDI0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
TRIM49BA6NDI0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.5■■□□□ 1.35
TRIM49BA6NDI0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.5■■□□□ 1.35
TRIM49BA6NDI0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.5■■□□□ 1.35
TRIM49BA6NDI0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.5■■□□□ 1.35
TRIM49BA6NDI0 AC008764.7-201ENST00000593779 1081 ntBASIC23.5■■□□□ 1.35
TRIM49BA6NDI0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM49BA6NDI0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.5■■□□□ 1.35
TRIM49BA6NDI0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM49BA6NDI0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.5■■□□□ 1.35
TRIM49BA6NDI0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM49BA6NDI0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.49■■□□□ 1.35
TRIM49BA6NDI0 AP006587.3-201ENST00000525742 1516 ntBASIC23.49■■□□□ 1.35
TRIM49BA6NDI0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM49BA6NDI0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.49■■□□□ 1.35
TRIM49BA6NDI0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
TRIM49BA6NDI0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.49■■□□□ 1.35
TRIM49BA6NDI0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.49■■□□□ 1.35
TRIM49BA6NDI0 PBX2P1-201ENST00000493219 1291 ntBASIC23.49■■□□□ 1.35
TRIM49BA6NDI0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.49■■□□□ 1.35
TRIM49BA6NDI0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM49BA6NDI0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.49■■□□□ 1.35
TRIM49BA6NDI0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM49BA6NDI0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM49BA6NDI0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM49BA6NDI0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM49BA6NDI0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
TRIM49BA6NDI0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM49BA6NDI0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.48■■□□□ 1.35
TRIM49BA6NDI0 AC099791.1-201ENST00000416440 715 ntBASIC23.48■■□□□ 1.35
TRIM49BA6NDI0 IGHV3-19-201ENST00000521488 291 ntBASIC23.48■■□□□ 1.35
TRIM49BA6NDI0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.48■■□□□ 1.35
TRIM49BA6NDI0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
TRIM49BA6NDI0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.48■■□□□ 1.35
TRIM49BA6NDI0 AC110285.6-201ENST00000617652 491 ntBASIC23.48■■□□□ 1.35
TRIM49BA6NDI0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM49BA6NDI0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM49BA6NDI0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM49BA6NDI0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.48■■□□□ 1.35
TRIM49BA6NDI0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM49BA6NDI0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.48■■□□□ 1.35
TRIM49BA6NDI0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
TRIM49BA6NDI0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM49BA6NDI0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.47■■□□□ 1.35
TRIM49BA6NDI0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms