Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IGHV4-28A0A0C4DH34 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.41■□□□□ 0.06
IGHV4-28A0A0C4DH34 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.41■□□□□ 0.06
IGHV4-28A0A0C4DH34 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC15.41■□□□□ 0.06
IGHV4-28A0A0C4DH34 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
IGHV4-28A0A0C4DH34 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
IGHV4-28A0A0C4DH34 AC127496.7-201ENST00000625110 1798 ntBASIC15.41■□□□□ 0.06
IGHV4-28A0A0C4DH34 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.41■□□□□ 0.06
IGHV4-28A0A0C4DH34 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC15.41■□□□□ 0.06
IGHV4-28A0A0C4DH34 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
IGHV4-28A0A0C4DH34 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IGHV4-28A0A0C4DH34 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
IGHV4-28A0A0C4DH34 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IGHV4-28A0A0C4DH34 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 AP006587.3-201ENST00000525742 1516 ntBASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 KRT19P1-201ENST00000405746 1186 ntBASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 AC137761.2-201ENST00000561729 223 ntBASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 AC145350.3-201ENST00000569033 163 ntBASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 AC080038.3-201ENST00000623346 1952 ntBASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
IGHV4-28A0A0C4DH34 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
IGHV4-28A0A0C4DH34 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.39■□□□□ 0.05
IGHV4-28A0A0C4DH34 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IGHV4-28A0A0C4DH34 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
IGHV4-28A0A0C4DH34 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
IGHV4-28A0A0C4DH34 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
IGHV4-28A0A0C4DH34 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IGHV4-28A0A0C4DH34 AC016769.1-201ENST00000409132 1010 ntBASIC15.39■□□□□ 0.05
IGHV4-28A0A0C4DH34 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.39■□□□□ 0.05
IGHV4-28A0A0C4DH34 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.39■□□□□ 0.05
IGHV4-28A0A0C4DH34 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.39■□□□□ 0.05
IGHV4-28A0A0C4DH34 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
IGHV4-28A0A0C4DH34 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IGHV4-28A0A0C4DH34 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IGHV4-28A0A0C4DH34 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IGHV4-28A0A0C4DH34 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC15.39■□□□□ 0.05
IGHV4-28A0A0C4DH34 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IGHV4-28A0A0C4DH34 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IGHV4-28A0A0C4DH34 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
IGHV4-28A0A0C4DH34 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
IGHV4-28A0A0C4DH34 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IGHV4-28A0A0C4DH34 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IGHV4-28A0A0C4DH34 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC15.38■□□□□ 0.05
IGHV4-28A0A0C4DH34 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IGHV4-28A0A0C4DH34 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IGHV4-28A0A0C4DH34 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC15.38■□□□□ 0.05
IGHV4-28A0A0C4DH34 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC15.38■□□□□ 0.05
IGHV4-28A0A0C4DH34 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IGHV4-28A0A0C4DH34 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
IGHV4-28A0A0C4DH34 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.38■□□□□ 0.05
IGHV4-28A0A0C4DH34 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.38■□□□□ 0.05
IGHV4-28A0A0C4DH34 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC15.38■□□□□ 0.05
IGHV4-28A0A0C4DH34 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
IGHV4-28A0A0C4DH34 AC092437.1-201ENST00000624794 1048 ntBASIC15.38■□□□□ 0.05
IGHV4-28A0A0C4DH34 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
IGHV4-28A0A0C4DH34 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
IGHV4-28A0A0C4DH34 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IGHV4-28A0A0C4DH34 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
IGHV4-28A0A0C4DH34 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
IGHV4-28A0A0C4DH34 PKD1P6-201ENST00000343738 4769 ntBASIC15.37■□□□□ 0.05
IGHV4-28A0A0C4DH34 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
IGHV4-28A0A0C4DH34 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
IGHV4-28A0A0C4DH34 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
IGHV4-28A0A0C4DH34 GALC-202ENST00000393568 2054 ntTSL 2 BASIC15.37■□□□□ 0.05
IGHV4-28A0A0C4DH34 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
IGHV4-28A0A0C4DH34 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
IGHV4-28A0A0C4DH34 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
IGHV4-28A0A0C4DH34 AC004911.1-201ENST00000416316 871 ntBASIC15.37■□□□□ 0.05
IGHV4-28A0A0C4DH34 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.37■□□□□ 0.05
IGHV4-28A0A0C4DH34 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
IGHV4-28A0A0C4DH34 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.37■□□□□ 0.05
IGHV4-28A0A0C4DH34 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
IGHV4-28A0A0C4DH34 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.37■□□□□ 0.05
IGHV4-28A0A0C4DH34 AC104187.1-201ENST00000607510 612 ntBASIC15.37■□□□□ 0.05
IGHV4-28A0A0C4DH34 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
IGHV4-28A0A0C4DH34 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms