Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.15■■□□□ 1.14
TRAV19A0A0A6YYK7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.15■■□□□ 1.14
TRAV19A0A0A6YYK7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TRAV19A0A0A6YYK7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
TRAV19A0A0A6YYK7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRAV19A0A0A6YYK7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRAV19A0A0A6YYK7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRAV19A0A0A6YYK7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRAV19A0A0A6YYK7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.15■■□□□ 1.14
TRAV19A0A0A6YYK7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.14■■□□□ 1.14
TRAV19A0A0A6YYK7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TRAV19A0A0A6YYK7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TRAV19A0A0A6YYK7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TRAV19A0A0A6YYK7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.14■■□□□ 1.14
TRAV19A0A0A6YYK7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRAV19A0A0A6YYK7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.14■■□□□ 1.13
TRAV19A0A0A6YYK7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.14■■□□□ 1.13
TRAV19A0A0A6YYK7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TRAV19A0A0A6YYK7 AC005181.1-201ENST00000604782 1256 ntBASIC22.14■■□□□ 1.13
TRAV19A0A0A6YYK7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TRAV19A0A0A6YYK7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TRAV19A0A0A6YYK7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TRAV19A0A0A6YYK7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TRAV19A0A0A6YYK7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRAV19A0A0A6YYK7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.13■■□□□ 1.13
TRAV19A0A0A6YYK7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRAV19A0A0A6YYK7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRAV19A0A0A6YYK7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRAV19A0A0A6YYK7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.13■■□□□ 1.13
TRAV19A0A0A6YYK7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.13■■□□□ 1.13
TRAV19A0A0A6YYK7 AC010536.3-201ENST00000620306 533 ntBASIC22.13■■□□□ 1.13
TRAV19A0A0A6YYK7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.13■■□□□ 1.13
TRAV19A0A0A6YYK7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
TRAV19A0A0A6YYK7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TRAV19A0A0A6YYK7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
TRAV19A0A0A6YYK7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.12■■□□□ 1.13
TRAV19A0A0A6YYK7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.12■■□□□ 1.13
TRAV19A0A0A6YYK7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRAV19A0A0A6YYK7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRAV19A0A0A6YYK7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
TRAV19A0A0A6YYK7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.12■■□□□ 1.13
TRAV19A0A0A6YYK7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.12■■□□□ 1.13
TRAV19A0A0A6YYK7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.12■■□□□ 1.13
TRAV19A0A0A6YYK7 AL355802.2-201ENST00000402069 882 ntBASIC22.12■■□□□ 1.13
TRAV19A0A0A6YYK7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.12■■□□□ 1.13
TRAV19A0A0A6YYK7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.12■■□□□ 1.13
TRAV19A0A0A6YYK7 AL121832.2-201ENST00000610979 668 ntBASIC22.12■■□□□ 1.13
TRAV19A0A0A6YYK7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRAV19A0A0A6YYK7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRAV19A0A0A6YYK7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRAV19A0A0A6YYK7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRAV19A0A0A6YYK7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRAV19A0A0A6YYK7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRAV19A0A0A6YYK7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TRAV19A0A0A6YYK7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TRAV19A0A0A6YYK7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.11■■□□□ 1.13
TRAV19A0A0A6YYK7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.11■■□□□ 1.13
TRAV19A0A0A6YYK7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRAV19A0A0A6YYK7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRAV19A0A0A6YYK7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.11■■□□□ 1.13
TRAV19A0A0A6YYK7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRAV19A0A0A6YYK7 SLC7A5P1-201ENST00000568957 537 ntBASIC22.11■■□□□ 1.13
TRAV19A0A0A6YYK7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRAV19A0A0A6YYK7 AL050303.2-201ENST00000619798 666 ntBASIC22.11■■□□□ 1.13
TRAV19A0A0A6YYK7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRAV19A0A0A6YYK7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRAV19A0A0A6YYK7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRAV19A0A0A6YYK7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRAV19A0A0A6YYK7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRAV19A0A0A6YYK7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRAV19A0A0A6YYK7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRAV19A0A0A6YYK7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
TRAV19A0A0A6YYK7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRAV19A0A0A6YYK7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.1■■□□□ 1.13
TRAV19A0A0A6YYK7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.1■■□□□ 1.13
TRAV19A0A0A6YYK7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TRAV19A0A0A6YYK7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRAV19A0A0A6YYK7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.1■■□□□ 1.13
TRAV19A0A0A6YYK7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TRAV19A0A0A6YYK7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
TRAV19A0A0A6YYK7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TRAV19A0A0A6YYK7 CNN2P6-201ENST00000439038 900 ntBASIC22.09■■□□□ 1.13
TRAV19A0A0A6YYK7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.09■■□□□ 1.13
TRAV19A0A0A6YYK7 SLC7A5P2-201ENST00000553010 536 ntBASIC22.09■■□□□ 1.13
TRAV19A0A0A6YYK7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.09■■□□□ 1.13
TRAV19A0A0A6YYK7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.09■■□□□ 1.13
TRAV19A0A0A6YYK7 AC008175.2-201ENST00000612840 297 ntBASIC22.09■■□□□ 1.13
TRAV19A0A0A6YYK7 AC120498.10-201ENST00000621827 505 ntBASIC22.09■■□□□ 1.13
TRAV19A0A0A6YYK7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
TRAV19A0A0A6YYK7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
TRAV19A0A0A6YYK7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRAV19A0A0A6YYK7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRAV19A0A0A6YYK7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.09■■□□□ 1.13
TRAV19A0A0A6YYK7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRAV19A0A0A6YYK7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TRAV19A0A0A6YYK7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
TRAV19A0A0A6YYK7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
TRAV19A0A0A6YYK7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.08■■□□□ 1.13
TRAV19A0A0A6YYK7 AC083906.2-201ENST00000511578 360 ntBASIC22.08■■□□□ 1.13
TRAV19A0A0A6YYK7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms