Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TRAV18A0A075B6X5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV18A0A075B6X5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TRAV18A0A075B6X5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV18A0A075B6X5 AC009102.2-201ENST00000606772 1639 ntBASIC18.32■□□□□ 0.52
TRAV18A0A075B6X5 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV18A0A075B6X5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV18A0A075B6X5 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TRAV18A0A075B6X5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAV18A0A075B6X5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV18A0A075B6X5 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV18A0A075B6X5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV18A0A075B6X5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAV18A0A075B6X5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV18A0A075B6X5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRAV18A0A075B6X5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV18A0A075B6X5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TRAV18A0A075B6X5 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV18A0A075B6X5 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV18A0A075B6X5 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV18A0A075B6X5 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRAV18A0A075B6X5 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV18A0A075B6X5 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV18A0A075B6X5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV18A0A075B6X5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRAV18A0A075B6X5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV18A0A075B6X5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV18A0A075B6X5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TRAV18A0A075B6X5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV18A0A075B6X5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV18A0A075B6X5 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV18A0A075B6X5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV18A0A075B6X5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
TRAV18A0A075B6X5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV18A0A075B6X5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV18A0A075B6X5 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TRAV18A0A075B6X5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV18A0A075B6X5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV18A0A075B6X5 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
TRAV18A0A075B6X5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRAV18A0A075B6X5 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV18A0A075B6X5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV18A0A075B6X5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV18A0A075B6X5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV18A0A075B6X5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV18A0A075B6X5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAV18A0A075B6X5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRAV18A0A075B6X5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV18A0A075B6X5 TSPY13P-201ENST00000338964 914 ntBASIC18.29■□□□□ 0.52
TRAV18A0A075B6X5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.29■□□□□ 0.52
TRAV18A0A075B6X5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.29■□□□□ 0.52
TRAV18A0A075B6X5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV18A0A075B6X5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV18A0A075B6X5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV18A0A075B6X5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV18A0A075B6X5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV18A0A075B6X5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV18A0A075B6X5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV18A0A075B6X5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV18A0A075B6X5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV18A0A075B6X5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
TRAV18A0A075B6X5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRAV18A0A075B6X5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV18A0A075B6X5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.28■□□□□ 0.52
TRAV18A0A075B6X5 AC079089.2-201ENST00000531211 1277 ntBASIC18.28■□□□□ 0.52
TRAV18A0A075B6X5 AC103724.3-201ENST00000564481 992 ntBASIC18.28■□□□□ 0.52
TRAV18A0A075B6X5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAV18A0A075B6X5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV18A0A075B6X5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV18A0A075B6X5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAV18A0A075B6X5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV18A0A075B6X5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV18A0A075B6X5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRAV18A0A075B6X5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV18A0A075B6X5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAV18A0A075B6X5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAV18A0A075B6X5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV18A0A075B6X5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV18A0A075B6X5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV18A0A075B6X5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV18A0A075B6X5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAV18A0A075B6X5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAV18A0A075B6X5 AC103834.1-201ENST00000520383 144 ntBASIC18.27■□□□□ 0.52
TRAV18A0A075B6X5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.27■□□□□ 0.52
TRAV18A0A075B6X5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.27■□□□□ 0.52
TRAV18A0A075B6X5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV18A0A075B6X5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV18A0A075B6X5 C17orf82-201ENST00000623772 1530 ntBASIC18.27■□□□□ 0.51
TRAV18A0A075B6X5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV18A0A075B6X5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV18A0A075B6X5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
TRAV18A0A075B6X5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV18A0A075B6X5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
TRAV18A0A075B6X5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV18A0A075B6X5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
TRAV18A0A075B6X5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRAV18A0A075B6X5 FEM1AP1-201ENST00000431297 1995 ntBASIC18.26■□□□□ 0.51
TRAV18A0A075B6X5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV18A0A075B6X5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV18A0A075B6X5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms