Protein–RNA interactions for Protein: A0A075B6N3

TRBV24-1, T-cell receptor beta variable 24-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV24-1A0A075B6N3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRBV24-1A0A075B6N3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV24-1A0A075B6N3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV24-1A0A075B6N3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV24-1A0A075B6N3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.28■□□□□ 0.2
TRBV24-1A0A075B6N3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRBV24-1A0A075B6N3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV24-1A0A075B6N3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV24-1A0A075B6N3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV24-1A0A075B6N3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC16.28■□□□□ 0.2
TRBV24-1A0A075B6N3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRBV24-1A0A075B6N3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV24-1A0A075B6N3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRBV24-1A0A075B6N3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV24-1A0A075B6N3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV24-1A0A075B6N3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV24-1A0A075B6N3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TRBV24-1A0A075B6N3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV24-1A0A075B6N3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.27■□□□□ 0.2
TRBV24-1A0A075B6N3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV24-1A0A075B6N3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV24-1A0A075B6N3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV24-1A0A075B6N3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TRBV24-1A0A075B6N3 RP9P-202ENST00000450133 1212 ntBASIC16.27■□□□□ 0.2
TRBV24-1A0A075B6N3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV24-1A0A075B6N3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRBV24-1A0A075B6N3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TRBV24-1A0A075B6N3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV24-1A0A075B6N3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.27■□□□□ 0.19
TRBV24-1A0A075B6N3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV24-1A0A075B6N3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV24-1A0A075B6N3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV24-1A0A075B6N3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV24-1A0A075B6N3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV24-1A0A075B6N3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV24-1A0A075B6N3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV24-1A0A075B6N3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV24-1A0A075B6N3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV24-1A0A075B6N3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV24-1A0A075B6N3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV24-1A0A075B6N3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV24-1A0A075B6N3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV24-1A0A075B6N3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV24-1A0A075B6N3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV24-1A0A075B6N3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV24-1A0A075B6N3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRBV24-1A0A075B6N3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV24-1A0A075B6N3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRBV24-1A0A075B6N3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
TRBV24-1A0A075B6N3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TRBV24-1A0A075B6N3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV24-1A0A075B6N3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.25■□□□□ 0.19
TRBV24-1A0A075B6N3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV24-1A0A075B6N3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV24-1A0A075B6N3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.25■□□□□ 0.19
TRBV24-1A0A075B6N3 LINC01960-201ENST00000563759 1884 ntBASIC16.25■□□□□ 0.19
TRBV24-1A0A075B6N3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV24-1A0A075B6N3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV24-1A0A075B6N3 AC060814.1-201ENST00000554326 538 ntBASIC16.25■□□□□ 0.19
TRBV24-1A0A075B6N3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV24-1A0A075B6N3 CR559946.2-201ENST00000623684 991 ntBASIC16.25■□□□□ 0.19
TRBV24-1A0A075B6N3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV24-1A0A075B6N3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV24-1A0A075B6N3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV24-1A0A075B6N3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV24-1A0A075B6N3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRBV24-1A0A075B6N3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV24-1A0A075B6N3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRBV24-1A0A075B6N3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRBV24-1A0A075B6N3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV24-1A0A075B6N3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV24-1A0A075B6N3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC16.24■□□□□ 0.19
TRBV24-1A0A075B6N3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV24-1A0A075B6N3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV24-1A0A075B6N3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV24-1A0A075B6N3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV24-1A0A075B6N3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV24-1A0A075B6N3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRBV24-1A0A075B6N3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRBV24-1A0A075B6N3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TRBV24-1A0A075B6N3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV24-1A0A075B6N3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV24-1A0A075B6N3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
TRBV24-1A0A075B6N3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV24-1A0A075B6N3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRBV24-1A0A075B6N3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
TRBV24-1A0A075B6N3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV24-1A0A075B6N3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV24-1A0A075B6N3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV24-1A0A075B6N3 TNXA-203ENST00000507684 2038 ntBASIC16.23■□□□□ 0.19
TRBV24-1A0A075B6N3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV24-1A0A075B6N3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV24-1A0A075B6N3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV24-1A0A075B6N3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC16.23■□□□□ 0.19
TRBV24-1A0A075B6N3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
TRBV24-1A0A075B6N3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRBV24-1A0A075B6N3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV24-1A0A075B6N3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV24-1A0A075B6N3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRBV24-1A0A075B6N3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms