Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 GALNT15-201ENST00000339732 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NPIPA3F8WFD2 ZFAND5-201ENST00000237937 5310 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 ZSCAN22-201ENST00000329665 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 AC092135.1-201ENST00000623398 2059 ntBASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 LTF-201ENST00000231751 2979 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 PHC1-201ENST00000433083 5033 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 DPP3-205ENST00000530165 2251 ntTSL 2 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 RAD51-202ENST00000382643 1588 ntTSL 2 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 TCEA3-203ENST00000450454 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 Z95115.1-201ENST00000566814 2032 ntBASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 PTGFR-201ENST00000370756 4450 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 AFDN-207ENST00000400822 7593 ntTSL 5 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 PSAPL1-201ENST00000319098 4680 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 OACYLP-201ENST00000417918 2208 ntBASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 SHOX-203ENST00000381578 3757 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 PGPEP1-202ENST00000269919 7092 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 SMARCE1-203ENST00000377808 1307 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 BMS1P4-201ENST00000441263 1332 ntBASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 CTBP1-AS2-202ENST00000505364 2423 ntTSL 2 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 EXOSC9-202ENST00000379663 1529 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 AC016355.1-201ENST00000604760 1533 ntBASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 PCDHGC3-201ENST00000308177 4725 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 IRF5-203ENST00000402030 2786 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 GDA-202ENST00000358399 5340 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 SUCLG2P2-201ENST00000307241 1296 ntBASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 MGST3-201ENST00000367883 706 ntTSL 3 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 AC097533.1-201ENST00000413478 479 ntBASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 AL359510.1-201ENST00000413855 208 ntBASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 CALN1-205ENST00000431984 777 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 AL118511.2-201ENST00000436739 311 ntTSL 3 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 AC131097.4-201ENST00000442867 571 ntTSL 4 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 GUSBP1-201ENST00000449061 758 ntBASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 CYCSP8-201ENST00000455007 312 ntBASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 CAPNS2-201ENST00000457326 1016 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 AC145285.1-201ENST00000469929 694 ntBASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 RN7SL278P-201ENST00000488843 296 ntBASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 snoZ6.1-201ENST00000516391 75 ntBASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 AP001972.2-201ENST00000529304 216 ntTSL 5 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 SLC16A7-209ENST00000549465 537 ntTSL 3 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 AC137932.1-201ENST00000563087 410 ntTSL 2 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 LINC02074-201ENST00000581028 569 ntTSL 4 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 LINC02074-202ENST00000584003 573 ntTSL 4 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 AC005381.1-201ENST00000593065 769 ntTSL 3 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 AC020909.3-201ENST00000598194 375 ntTSL 3 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 AC007032.1-201ENST00000609281 847 ntBASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 TEX28-201ENST00000610938 1233 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 Metazoa_SRP.151-201ENST00000616313 273 ntBASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 AC109826.1-203ENST00000624259 1105 ntTSL 5 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 FAAHP1-206ENST00000635298 708 ntTSL 5 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 LINC00680-206ENST00000635948 181 ntBASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 KBTBD12-203ENST00000405256 5268 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 CHML-201ENST00000366553 7594 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 IGBP1-201ENST00000342206 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 MEF2C-213ENST00000508569 1882 ntTSL 5 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 DGKZ-220ENST00000532868 3118 ntTSL 2 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 NOL12-201ENST00000359114 2854 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 ZIK1-207ENST00000599456 2860 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 FHIT-204ENST00000468189 1634 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
NPIPA3F8WFD2 LRRIQ4-201ENST00000340806 1827 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
NPIPA3F8WFD2 SMARCA2-258ENST00000637103 5657 ntTSL 5 BASIC10.65□□□□□ -0.71
NPIPA3F8WFD2 ATIC-201ENST00000236959 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
NPIPA3F8WFD2 AC005070.3-201ENST00000607968 2646 ntBASIC10.65□□□□□ -0.71
NPIPA3F8WFD2 NTM-203ENST00000374791 3040 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
NPIPA3F8WFD2 CNTROB-201ENST00000380262 3769 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
NPIPA3F8WFD2 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
NPIPA3F8WFD2 AC079594.2-201ENST00000483754 3360 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
NPIPA3F8WFD2 AC024614.4-201ENST00000637454 2396 ntTSL 5 BASIC10.65□□□□□ -0.71
NPIPA3F8WFD2 TRIM51CP-201ENST00000505076 1357 ntBASIC10.65□□□□□ -0.71
NPIPA3F8WFD2 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
NPIPA3F8WFD2 JPT2-201ENST00000248098 3718 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
NPIPA3F8WFD2 LIMCH1-208ENST00000508501 5054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 LIMCH1-217ENST00000512946 5057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 SIN3A-208ENST00000567289 4078 ntTSL 2 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 MYO7A-211ENST00000620575 4016 ntTSL 5 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 SHC4-201ENST00000332408 4558 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 PLEKHG5-204ENST00000377732 3753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 DPY19L3-201ENST00000342179 6015 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 PHF8-204ENST00000357988 6024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 SGSM1-202ENST00000400359 4317 ntAPPRIS P4 TSL 5 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 FNDC3B-202ENST00000415807 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 HSBP1-201ENST00000433866 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 RFC3-201ENST00000380071 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 SLC2A12-201ENST00000275230 4468 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 DCTN2-201ENST00000434715 1677 ntTSL 5 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 TRMT12-201ENST00000328599 2207 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 NR2F2-203ENST00000421109 2214 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 DNAI2-206ENST00000582036 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 DDX4-201ENST00000353507 2778 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 TNC-203ENST00000423613 6281 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 OR10N1P-202ENST00000641519 1479 ntBASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 NIPAL1-201ENST00000295461 5300 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 EZR-203ENST00000392177 2933 ntAPPRIS ALT1 TSL 5 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 MOG-219ENST00000376898 1027 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 CCDC103-203ENST00000410027 571 ntTSL 4 BASIC10.64□□□□□ -0.71
NPIPA3F8WFD2 LINC02054-201ENST00000419960 885 ntTSL 3 BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 414.5 ms