RNA–Protein interactions for RNA: ENST00000370756.3

PTGFR-201, Transcript of prostaglandin F receptor, humanhuman

TSL 1 (best) BASIC

Gene PTGFR, Length 4,450 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGFR-201ENST00000370756 NISCHQ9Y2I1 1504 aa21.91■■□□□ 1.1
PTGFR-201ENST00000370756 DCAF8L2P0C7V8 631 aa20.96■□□□□ 0.95
PTGFR-201ENST00000370756 SHROOM4Q9ULL8 1493 aa20.4■□□□□ 0.86
PTGFR-201ENST00000370756 SUPT5HO00267 1087 aaKnown RBP20.3■□□□□ 0.84
PTGFR-201ENST00000370756 EHMT2Q96KQ7 1210 aa19.4■□□□□ 0.7
PTGFR-201ENST00000370756 FAM9AQ8IZU1 332 aaPredicted RBP19.04■□□□□ 0.64
PTGFR-201ENST00000370756 PCGF6Q9BYE7 350 aa18.83■□□□□ 0.61
PTGFR-201ENST00000370756 CHIC1Q5VXU3 224 aa18.66■□□□□ 0.58
PTGFR-201ENST00000370756 TTBK1Q5TCY1 1321 aaPredicted RBP18.65■□□□□ 0.58
PTGFR-201ENST00000370756 TRIM41Q8WV44 630 aa18.65■□□□□ 0.58
PTGFR-201ENST00000370756 LOC105371045A0A1W2PR82 267 aa18.61■□□□□ 0.57
PTGFR-201ENST00000370756 PPARGC1BQ86YN6 1023 aaKnown RBP18.45■□□□□ 0.54
PTGFR-201ENST00000370756 ABCC9O60706 1549 aa18.44■□□□□ 0.54
PTGFR-201ENST00000370756 RANGAP1P46060 587 aaPredicted RBP18.42■□□□□ 0.54
PTGFR-201ENST00000370756 ZCCHC6Q5VYS8 1495 aaKnown RBP18.26■□□□□ 0.51
PTGFR-201ENST00000370756 PABPN1Q86U42 306 aaKnown RBP eCLIP18.2■□□□□ 0.5
PTGFR-201ENST00000370756 UBTFP17480 764 aaKnown RBP18.16■□□□□ 0.5
PTGFR-201ENST00000370756 APLP2Q06481 763 aa18.07■□□□□ 0.48
PTGFR-201ENST00000370756 HRCP23327 699 aa18.02■□□□□ 0.48
PTGFR-201ENST00000370756 TRIM26Q12899 539 aaPredicted RBP17.99■□□□□ 0.47
PTGFR-201ENST00000370756 CCER1Q8TC90 406 aaPredicted RBP17.98■□□□□ 0.47
PTGFR-201ENST00000370756 CCDC180Q9P1Z9 1646 aa17.93■□□□□ 0.46
PTGFR-201ENST00000370756 SCRIBQ14160 1630 aa17.92■□□□□ 0.46
PTGFR-201ENST00000370756 ATP1B4Q9UN42 357 aaPredicted RBP17.84■□□□□ 0.45
PTGFR-201ENST00000370756 MYO15BQ96JP2 1530 aa17.81■□□□□ 0.44
PTGFR-201ENST00000370756 ZEB1P37275 1124 aaPredicted RBP17.72■□□□□ 0.43
PTGFR-201ENST00000370756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.71■□□□□ 0.43
PTGFR-201ENST00000370756 HNRNPUL2Q1KMD3 747 aaKnown RBP17.66■□□□□ 0.42
PTGFR-201ENST00000370756 ITGAEP38570 1179 aa17.61■□□□□ 0.41
PTGFR-201ENST00000370756 RSF1Q96T23 1441 aaPredicted RBP17.58■□□□□ 0.41
PTGFR-201ENST00000370756 YTHDC1Q96MU7 727 aaKnown RBP17.51■□□□□ 0.39
PTGFR-201ENST00000370756 CECR2Q9BXF3 1484 aa17.45■□□□□ 0.38
PTGFR-201ENST00000370756 CSRNP3Q8WYN3 585 aa17.41■□□□□ 0.38
PTGFR-201ENST00000370756 DCAF1Q9Y4B6 1507 aa17.31■□□□□ 0.36
PTGFR-201ENST00000370756 CENPBP07199 599 aaPredicted RBP17.27■□□□□ 0.35
PTGFR-201ENST00000370756 P3H3Q8IVL6 736 aa17.23■□□□□ 0.35
PTGFR-201ENST00000370756 NACADO15069 1562 aa17.19■□□□□ 0.34
PTGFR-201ENST00000370756 RB1CC1Q8TDY2 1594 aa17.19■□□□□ 0.34
PTGFR-201ENST00000370756 MROH2BQ7Z745 1585 aa17.17■□□□□ 0.34
PTGFR-201ENST00000370756 DIEXFQ68CQ4 756 aaKnown RBP17.17■□□□□ 0.34
PTGFR-201ENST00000370756 FAM50AQ14320 339 aaKnown RBP17.13■□□□□ 0.33
PTGFR-201ENST00000370756 ARID3CA6NKF2 412 aa17.06■□□□□ 0.32
PTGFR-201ENST00000370756 NEUROD1Q13562 356 aa17.01■□□□□ 0.31
PTGFR-201ENST00000370756 CNGB1Q14028 1251 aaPredicted RBP16.99■□□□□ 0.31
PTGFR-201ENST00000370756 SOGA1O94964 1423 aa16.97■□□□□ 0.31
PTGFR-201ENST00000370756 BAZ1AQ9NRL2 1556 aaPredicted RBP16.95■□□□□ 0.3
PTGFR-201ENST00000370756 WIZO95785 1651 aa16.95■□□□□ 0.3
PTGFR-201ENST00000370756 ABCC8Q09428 1581 aa16.93■□□□□ 0.3
PTGFR-201ENST00000370756 CEP162Q5TB80 1403 aa16.92■□□□□ 0.3
PTGFR-201ENST00000370756 WRNQ14191 1432 aaPredicted RBP eCLIP16.92■□□□□ 0.3
PTGFR-201ENST00000370756 FBLN2P98095 1184 aa16.9■□□□□ 0.3
PTGFR-201ENST00000370756 CCDC88BA6NC98 1476 aa16.9■□□□□ 0.3
PTGFR-201ENST00000370756 POLR3GLQ9BT43 218 aa16.88■□□□□ 0.29
PTGFR-201ENST00000370756 ZNF316A6NFI3 1004 aaPredicted RBP16.87■□□□□ 0.29
PTGFR-201ENST00000370756 PELP1Q8IZL8 1130 aaKnown RBP16.86■□□□□ 0.29
PTGFR-201ENST00000370756 BAZ1BQ9UIG0 1483 aaKnown RBP16.86■□□□□ 0.29
PTGFR-201ENST00000370756 CLIP1P30622 1438 aa16.85■□□□□ 0.29
PTGFR-201ENST00000370756 TRIM52Q96A61 297 aa16.8■□□□□ 0.28
PTGFR-201ENST00000370756 GTF3C3Q9Y5Q9 886 aa16.8■□□□□ 0.28
PTGFR-201ENST00000370756 TNIKQ9UKE5 1360 aa16.74■□□□□ 0.27
PTGFR-201ENST00000370756 GOLGA3Q08378 1498 aa16.74■□□□□ 0.27
PTGFR-201ENST00000370756 RUSC2Q8N2Y8 1516 aa16.71■□□□□ 0.26
PTGFR-201ENST00000370756 MYT1LQ9UL68 1186 aa16.68■□□□□ 0.26
PTGFR-201ENST00000370756 EEA1Q15075 1411 aa16.66■□□□□ 0.26
PTGFR-201ENST00000370756 NEFLP07196 543 aa16.65■□□□□ 0.26
PTGFR-201ENST00000370756 ACIN1Q9UKV3 1341 aaKnown RBP16.65■□□□□ 0.26
PTGFR-201ENST00000370756 HIRIP3Q9BW71 556 aaPredicted RBP16.64■□□□□ 0.25
PTGFR-201ENST00000370756 CHIC2Q9UKJ5 165 aa16.64■□□□□ 0.25
PTGFR-201ENST00000370756 ZNF326Q5BKZ1 582 aaKnown RBP16.63■□□□□ 0.25
PTGFR-201ENST00000370756 ZNF777Q9ULD5 760 aaPredicted RBP16.61■□□□□ 0.25
PTGFR-201ENST00000370756 CEP164Q9UPV0 1460 aa16.6■□□□□ 0.25
PTGFR-201ENST00000370756 MIER1Q8N108 512 aa16.6■□□□□ 0.25
PTGFR-201ENST00000370756 TOP2AP11388 1531 aaKnown RBP16.6■□□□□ 0.25
PTGFR-201ENST00000370756 BCANQ96GW7 911 aa16.59■□□□□ 0.25
PTGFR-201ENST00000370756 KANK4Q5T7N3 995 aaPredicted RBP16.57■□□□□ 0.24
PTGFR-201ENST00000370756 SMARCA4P51532 1647 aa16.56■□□□□ 0.24
PTGFR-201ENST00000370756 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
PTGFR-201ENST00000370756 KIF27Q86VH2 1401 aa16.55■□□□□ 0.24
PTGFR-201ENST00000370756 DDX10Q13206 875 aaKnown RBP16.53■□□□□ 0.24
PTGFR-201ENST00000370756 ATAD2BQ9ULI0 1458 aa16.52■□□□□ 0.24
PTGFR-201ENST00000370756 CUX2O14529 1486 aa16.47■□□□□ 0.23
PTGFR-201ENST00000370756 RRP7BPQ9NSQ0 103 aa16.45■□□□□ 0.22
PTGFR-201ENST00000370756 RAPGEF2Q9Y4G8 1499 aa16.44■□□□□ 0.22
PTGFR-201ENST00000370756 MTUS2Q5JR59 1369 aa16.44■□□□□ 0.22
PTGFR-201ENST00000370756 SIN3AQ96ST3 1273 aa16.43■□□□□ 0.22
PTGFR-201ENST00000370756 ANP32CO43423 234 aa16.43■□□□□ 0.22
PTGFR-201ENST00000370756 SMARCA2P51531 1590 aa16.42■□□□□ 0.22
PTGFR-201ENST00000370756 CARMIL1Q5VZK9 1371 aa16.41■□□□□ 0.22
PTGFR-201ENST00000370756 VPS8Q8N3P4 1428 aa16.39■□□□□ 0.21
PTGFR-201ENST00000370756 TONSLQ96HA7 1378 aa16.37■□□□□ 0.21
PTGFR-201ENST00000370756 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
PTGFR-201ENST00000370756 TDRD9Q8NDG6 1382 aaKnown RBP16.35■□□□□ 0.21
PTGFR-201ENST00000370756 CDK11AQ9UQ88 783 aaPredicted RBP16.32■□□□□ 0.2
PTGFR-201ENST00000370756 ERICH6Q7L0X2 663 aa16.31■□□□□ 0.2
PTGFR-201ENST00000370756 CCNB3Q8WWL7 1395 aa16.29■□□□□ 0.2
PTGFR-201ENST00000370756 SLC4A1APQ9BWU0 796 aaKnown RBP16.27■□□□□ 0.19
PTGFR-201ENST00000370756 CADPSQ9ULU8 1353 aa16.26■□□□□ 0.19
PTGFR-201ENST00000370756 SENP3-EIF4A1A0A087X0R7 540 aa16.25■□□□□ 0.19
PTGFR-201ENST00000370756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.23■□□□□ 0.19
PTGFR-201ENST00000370756 KDM2AQ9Y2K7 1162 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms