Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC32.16■■■□□ 2.74
SHANK2Q9UPX8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
SHANK2Q9UPX8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
SHANK2Q9UPX8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC32.16■■■□□ 2.74
SHANK2Q9UPX8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
SHANK2Q9UPX8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC32.16■■■□□ 2.74
SHANK2Q9UPX8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC32.16■■■□□ 2.74
SHANK2Q9UPX8 AC083906.2-201ENST00000511578 360 ntBASIC32.16■■■□□ 2.74
SHANK2Q9UPX8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC32.16■■■□□ 2.74
SHANK2Q9UPX8 KRT18P6-201ENST00000555540 1265 ntBASIC32.16■■■□□ 2.74
SHANK2Q9UPX8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC32.16■■■□□ 2.74
SHANK2Q9UPX8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC32.16■■■□□ 2.74
SHANK2Q9UPX8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC32.15■■■□□ 2.74
SHANK2Q9UPX8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC32.15■■■□□ 2.74
SHANK2Q9UPX8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC32.15■■■□□ 2.74
SHANK2Q9UPX8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC32.15■■■□□ 2.74
SHANK2Q9UPX8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC32.15■■■□□ 2.74
SHANK2Q9UPX8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
SHANK2Q9UPX8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
SHANK2Q9UPX8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC32.14■■■□□ 2.74
SHANK2Q9UPX8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
SHANK2Q9UPX8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
SHANK2Q9UPX8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
SHANK2Q9UPX8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC32.14■■■□□ 2.74
SHANK2Q9UPX8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC32.14■■■□□ 2.74
SHANK2Q9UPX8 DET1-205ENST00000558413 583 ntTSL 4 BASIC32.14■■■□□ 2.74
SHANK2Q9UPX8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC32.14■■■□□ 2.74
SHANK2Q9UPX8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
SHANK2Q9UPX8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC32.14■■■□□ 2.73
SHANK2Q9UPX8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC32.14■■■□□ 2.73
SHANK2Q9UPX8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC32.13■■■□□ 2.73
SHANK2Q9UPX8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
SHANK2Q9UPX8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
SHANK2Q9UPX8 MIR4651-201ENST00000582622 73 ntBASIC32.13■■■□□ 2.73
SHANK2Q9UPX8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
SHANK2Q9UPX8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
SHANK2Q9UPX8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC32.12■■■□□ 2.73
SHANK2Q9UPX8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
SHANK2Q9UPX8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC32.12■■■□□ 2.73
SHANK2Q9UPX8 AC069152.1-201ENST00000438030 544 ntBASIC32.12■■■□□ 2.73
SHANK2Q9UPX8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC32.12■■■□□ 2.73
SHANK2Q9UPX8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
SHANK2Q9UPX8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
SHANK2Q9UPX8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
SHANK2Q9UPX8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC32.11■■■□□ 2.73
SHANK2Q9UPX8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC32.11■■■□□ 2.73
SHANK2Q9UPX8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC32.11■■■□□ 2.73
SHANK2Q9UPX8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC32.11■■■□□ 2.73
SHANK2Q9UPX8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC32.11■■■□□ 2.73
SHANK2Q9UPX8 MARS-234ENST00000630571 216 ntTSL 5 BASIC32.11■■■□□ 2.73
SHANK2Q9UPX8 MARS-235ENST00000630803 183 ntTSL 3 BASIC32.11■■■□□ 2.73
SHANK2Q9UPX8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC32.11■■■□□ 2.73
SHANK2Q9UPX8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC32.1■■■□□ 2.73
SHANK2Q9UPX8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
SHANK2Q9UPX8 AC073210.2-201ENST00000430369 194 ntBASIC32.1■■■□□ 2.73
SHANK2Q9UPX8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC32.1■■■□□ 2.73
SHANK2Q9UPX8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC32.1■■■□□ 2.73
SHANK2Q9UPX8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC32.1■■■□□ 2.73
SHANK2Q9UPX8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC32.1■■■□□ 2.73
SHANK2Q9UPX8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC32.1■■■□□ 2.73
SHANK2Q9UPX8 NFE2L3P1-201ENST00000588207 1959 ntBASIC32.1■■■□□ 2.73
SHANK2Q9UPX8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
SHANK2Q9UPX8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
SHANK2Q9UPX8 SLC29A4P1-201ENST00000398760 971 ntBASIC32.1■■■□□ 2.73
SHANK2Q9UPX8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC32.1■■■□□ 2.73
SHANK2Q9UPX8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC32.1■■■□□ 2.73
SHANK2Q9UPX8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC32.1■■■□□ 2.73
SHANK2Q9UPX8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
SHANK2Q9UPX8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
SHANK2Q9UPX8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
SHANK2Q9UPX8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
SHANK2Q9UPX8 AC139530.1-201ENST00000575312 1977 ntBASIC32.09■■■□□ 2.73
SHANK2Q9UPX8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
SHANK2Q9UPX8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
SHANK2Q9UPX8 AC068338.2-201ENST00000563278 1430 ntBASIC32.09■■■□□ 2.73
SHANK2Q9UPX8 AF201337.1-201ENST00000520239 748 ntBASIC32.09■■■□□ 2.73
SHANK2Q9UPX8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC32.09■■■□□ 2.73
SHANK2Q9UPX8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC32.09■■■□□ 2.73
SHANK2Q9UPX8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
SHANK2Q9UPX8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
SHANK2Q9UPX8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC32.08■■■□□ 2.73
SHANK2Q9UPX8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
SHANK2Q9UPX8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
SHANK2Q9UPX8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC32.08■■■□□ 2.73
SHANK2Q9UPX8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC32.08■■■□□ 2.73
SHANK2Q9UPX8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC32.08■■■□□ 2.73
SHANK2Q9UPX8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC32.08■■■□□ 2.73
SHANK2Q9UPX8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC32.08■■■□□ 2.73
SHANK2Q9UPX8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC32.08■■■□□ 2.73
SHANK2Q9UPX8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
SHANK2Q9UPX8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
SHANK2Q9UPX8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC32.07■■■□□ 2.72
SHANK2Q9UPX8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC32.07■■■□□ 2.72
SHANK2Q9UPX8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
SHANK2Q9UPX8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC32.07■■■□□ 2.72
SHANK2Q9UPX8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
SHANK2Q9UPX8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
SHANK2Q9UPX8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC32.06■■■□□ 2.72
SHANK2Q9UPX8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
SHANK2Q9UPX8 TERF1P5-201ENST00000477545 1207 ntBASIC32.06■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms