Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 DUX4L16-201ENST00000555130 1264 ntBASIC20.74■□□□□ 0.91
LRIT1Q9P2V4 AC138907.5-202ENST00000569484 235 ntBASIC20.74■□□□□ 0.91
LRIT1Q9P2V4 AC087742.1-201ENST00000575880 1738 ntBASIC20.74■□□□□ 0.91
LRIT1Q9P2V4 AC231657.2-201ENST00000624556 255 ntBASIC20.74■□□□□ 0.91
LRIT1Q9P2V4 MYCNOS-205ENST00000641950 531 ntBASIC20.74■□□□□ 0.91
LRIT1Q9P2V4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRIT1Q9P2V4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRIT1Q9P2V4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRIT1Q9P2V4 AC137767.1-201ENST00000602918 1920 ntBASIC20.73■□□□□ 0.91
LRIT1Q9P2V4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LRIT1Q9P2V4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRIT1Q9P2V4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRIT1Q9P2V4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.73■□□□□ 0.91
LRIT1Q9P2V4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.73■□□□□ 0.91
LRIT1Q9P2V4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.73■□□□□ 0.91
LRIT1Q9P2V4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.73■□□□□ 0.91
LRIT1Q9P2V4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.73■□□□□ 0.91
LRIT1Q9P2V4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.73■□□□□ 0.91
LRIT1Q9P2V4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.73■□□□□ 0.91
LRIT1Q9P2V4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRIT1Q9P2V4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRIT1Q9P2V4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRIT1Q9P2V4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRIT1Q9P2V4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.72■□□□□ 0.91
LRIT1Q9P2V4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRIT1Q9P2V4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.72■□□□□ 0.91
LRIT1Q9P2V4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRIT1Q9P2V4 GPX1P1-201ENST00000388829 606 ntBASIC20.72■□□□□ 0.91
LRIT1Q9P2V4 AC007322.1-201ENST00000426983 750 ntBASIC20.72■□□□□ 0.91
LRIT1Q9P2V4 AC010141.2-201ENST00000452426 721 ntBASIC20.72■□□□□ 0.91
LRIT1Q9P2V4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.72■□□□□ 0.91
LRIT1Q9P2V4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
LRIT1Q9P2V4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.72■□□□□ 0.91
LRIT1Q9P2V4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.72■□□□□ 0.91
LRIT1Q9P2V4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.72■□□□□ 0.91
LRIT1Q9P2V4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.72■□□□□ 0.91
LRIT1Q9P2V4 AP006587.3-201ENST00000525742 1516 ntBASIC20.72■□□□□ 0.91
LRIT1Q9P2V4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRIT1Q9P2V4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.71■□□□□ 0.91
LRIT1Q9P2V4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
LRIT1Q9P2V4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRIT1Q9P2V4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LRIT1Q9P2V4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.71■□□□□ 0.91
LRIT1Q9P2V4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRIT1Q9P2V4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.71■□□□□ 0.91
LRIT1Q9P2V4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRIT1Q9P2V4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRIT1Q9P2V4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRIT1Q9P2V4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRIT1Q9P2V4 AL355802.2-201ENST00000402069 882 ntBASIC20.71■□□□□ 0.91
LRIT1Q9P2V4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRIT1Q9P2V4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.71■□□□□ 0.91
LRIT1Q9P2V4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.71■□□□□ 0.91
LRIT1Q9P2V4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.71■□□□□ 0.91
LRIT1Q9P2V4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRIT1Q9P2V4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LRIT1Q9P2V4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRIT1Q9P2V4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
LRIT1Q9P2V4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 KRT18P20-201ENST00000548986 1279 ntBASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRIT1Q9P2V4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LRIT1Q9P2V4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.69■□□□□ 0.9
LRIT1Q9P2V4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
LRIT1Q9P2V4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRIT1Q9P2V4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
LRIT1Q9P2V4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRIT1Q9P2V4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRIT1Q9P2V4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRIT1Q9P2V4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.68■□□□□ 0.9
LRIT1Q9P2V4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRIT1Q9P2V4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRIT1Q9P2V4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRIT1Q9P2V4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRIT1Q9P2V4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRIT1Q9P2V4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRIT1Q9P2V4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.68■□□□□ 0.9
LRIT1Q9P2V4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms