Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB16Q9NRJ7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB16Q9NRJ7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
PCDHB16Q9NRJ7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHB16Q9NRJ7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PCDHB16Q9NRJ7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB16Q9NRJ7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB16Q9NRJ7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB16Q9NRJ7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB16Q9NRJ7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB16Q9NRJ7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB16Q9NRJ7 GUSBP5-201ENST00000418136 578 ntBASIC18.48■□□□□ 0.55
PCDHB16Q9NRJ7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHB16Q9NRJ7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PCDHB16Q9NRJ7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHB16Q9NRJ7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PCDHB16Q9NRJ7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB16Q9NRJ7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB16Q9NRJ7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB16Q9NRJ7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHB16Q9NRJ7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB16Q9NRJ7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB16Q9NRJ7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB16Q9NRJ7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB16Q9NRJ7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB16Q9NRJ7 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB16Q9NRJ7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB16Q9NRJ7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB16Q9NRJ7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PCDHB16Q9NRJ7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB16Q9NRJ7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB16Q9NRJ7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB16Q9NRJ7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
PCDHB16Q9NRJ7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB16Q9NRJ7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB16Q9NRJ7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB16Q9NRJ7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB16Q9NRJ7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB16Q9NRJ7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB16Q9NRJ7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.46■□□□□ 0.55
PCDHB16Q9NRJ7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB16Q9NRJ7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
PCDHB16Q9NRJ7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB16Q9NRJ7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB16Q9NRJ7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB16Q9NRJ7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB16Q9NRJ7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB16Q9NRJ7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB16Q9NRJ7 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.46■□□□□ 0.55
PCDHB16Q9NRJ7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB16Q9NRJ7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB16Q9NRJ7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHB16Q9NRJ7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB16Q9NRJ7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB16Q9NRJ7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHB16Q9NRJ7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB16Q9NRJ7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB16Q9NRJ7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB16Q9NRJ7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB16Q9NRJ7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
PCDHB16Q9NRJ7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB16Q9NRJ7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHB16Q9NRJ7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB16Q9NRJ7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDHB16Q9NRJ7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PCDHB16Q9NRJ7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
PCDHB16Q9NRJ7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHB16Q9NRJ7 AL356740.2-201ENST00000601559 647 ntBASIC18.45■□□□□ 0.54
PCDHB16Q9NRJ7 AC092171.4-201ENST00000609130 632 ntBASIC18.45■□□□□ 0.54
PCDHB16Q9NRJ7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PCDHB16Q9NRJ7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB16Q9NRJ7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB16Q9NRJ7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB16Q9NRJ7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB16Q9NRJ7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB16Q9NRJ7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDHB16Q9NRJ7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB16Q9NRJ7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PCDHB16Q9NRJ7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB16Q9NRJ7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB16Q9NRJ7 KRT16P3-201ENST00000439127 1283 ntBASIC18.44■□□□□ 0.54
PCDHB16Q9NRJ7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHB16Q9NRJ7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB16Q9NRJ7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB16Q9NRJ7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB16Q9NRJ7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB16Q9NRJ7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHB16Q9NRJ7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PCDHB16Q9NRJ7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHB16Q9NRJ7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDHB16Q9NRJ7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB16Q9NRJ7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB16Q9NRJ7 AC079089.2-201ENST00000531211 1277 ntBASIC18.43■□□□□ 0.54
PCDHB16Q9NRJ7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHB16Q9NRJ7 AC087239.1-201ENST00000622671 572 ntBASIC18.43■□□□□ 0.54
PCDHB16Q9NRJ7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB16Q9NRJ7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB16Q9NRJ7 AC133637.1-201ENST00000624115 1537 ntBASIC18.43■□□□□ 0.54
PCDHB16Q9NRJ7 AC007952.6-201ENST00000573168 2673 ntBASIC18.43■□□□□ 0.54
PCDHB16Q9NRJ7 AC003957.1-201ENST00000625108 2673 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms