Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SPTBN4Q9H254 AC004687.1-201ENST00000579003 1625 ntBASIC20.79■□□□□ 0.92
SPTBN4Q9H254 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.79■□□□□ 0.92
SPTBN4Q9H254 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPTBN4Q9H254 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.79■□□□□ 0.92
SPTBN4Q9H254 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.79■□□□□ 0.92
SPTBN4Q9H254 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.78■□□□□ 0.92
SPTBN4Q9H254 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPTBN4Q9H254 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPTBN4Q9H254 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPTBN4Q9H254 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.78■□□□□ 0.92
SPTBN4Q9H254 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.78■□□□□ 0.92
SPTBN4Q9H254 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.78■□□□□ 0.92
SPTBN4Q9H254 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPTBN4Q9H254 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SPTBN4Q9H254 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPTBN4Q9H254 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPTBN4Q9H254 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.78■□□□□ 0.92
SPTBN4Q9H254 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.78■□□□□ 0.92
SPTBN4Q9H254 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.78■□□□□ 0.92
SPTBN4Q9H254 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SPTBN4Q9H254 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SPTBN4Q9H254 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SPTBN4Q9H254 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SPTBN4Q9H254 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SPTBN4Q9H254 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.77■□□□□ 0.92
SPTBN4Q9H254 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPTBN4Q9H254 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SPTBN4Q9H254 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.77■□□□□ 0.91
SPTBN4Q9H254 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SPTBN4Q9H254 PNMA6B-201ENST00000538162 1200 ntBASIC20.77■□□□□ 0.91
SPTBN4Q9H254 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SPTBN4Q9H254 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.76■□□□□ 0.91
SPTBN4Q9H254 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SPTBN4Q9H254 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SPTBN4Q9H254 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SPTBN4Q9H254 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPTBN4Q9H254 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPTBN4Q9H254 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SPTBN4Q9H254 KRT126P-201ENST00000549467 1181 ntBASIC20.76■□□□□ 0.91
SPTBN4Q9H254 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.76■□□□□ 0.91
SPTBN4Q9H254 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.76■□□□□ 0.91
SPTBN4Q9H254 AC068587.7-201ENST00000641602 218 ntBASIC20.76■□□□□ 0.91
SPTBN4Q9H254 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPTBN4Q9H254 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SPTBN4Q9H254 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SPTBN4Q9H254 KRT17P3-201ENST00000420566 1262 ntBASIC20.76■□□□□ 0.91
SPTBN4Q9H254 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPTBN4Q9H254 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.75■□□□□ 0.91
SPTBN4Q9H254 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.75■□□□□ 0.91
SPTBN4Q9H254 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPTBN4Q9H254 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.75■□□□□ 0.91
SPTBN4Q9H254 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPTBN4Q9H254 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SPTBN4Q9H254 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SPTBN4Q9H254 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPTBN4Q9H254 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.75■□□□□ 0.91
SPTBN4Q9H254 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPTBN4Q9H254 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SPTBN4Q9H254 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.74■□□□□ 0.91
SPTBN4Q9H254 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SPTBN4Q9H254 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPTBN4Q9H254 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SPTBN4Q9H254 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SPTBN4Q9H254 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.74■□□□□ 0.91
SPTBN4Q9H254 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.74■□□□□ 0.91
SPTBN4Q9H254 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SPTBN4Q9H254 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.74■□□□□ 0.91
SPTBN4Q9H254 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPTBN4Q9H254 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.73■□□□□ 0.91
SPTBN4Q9H254 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPTBN4Q9H254 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPTBN4Q9H254 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
SPTBN4Q9H254 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPTBN4Q9H254 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.73■□□□□ 0.91
SPTBN4Q9H254 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SPTBN4Q9H254 AC060766.5-201ENST00000590539 871 ntBASIC20.73■□□□□ 0.91
SPTBN4Q9H254 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.73■□□□□ 0.91
SPTBN4Q9H254 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SPTBN4Q9H254 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SPTBN4Q9H254 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.73■□□□□ 0.91
SPTBN4Q9H254 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.73■□□□□ 0.91
SPTBN4Q9H254 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPTBN4Q9H254 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
SPTBN4Q9H254 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.73■□□□□ 0.91
SPTBN4Q9H254 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTBN4Q9H254 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.72■□□□□ 0.91
SPTBN4Q9H254 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.72■□□□□ 0.91
SPTBN4Q9H254 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.72■□□□□ 0.91
SPTBN4Q9H254 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.72■□□□□ 0.91
SPTBN4Q9H254 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTBN4Q9H254 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPTBN4Q9H254 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTBN4Q9H254 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTBN4Q9H254 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPTBN4Q9H254 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPTBN4Q9H254 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
SPTBN4Q9H254 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.72■□□□□ 0.91
SPTBN4Q9H254 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTBN4Q9H254 SOX15-203ENST00000570788 1093 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms