Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTNAP3Q9BZ76 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CNTNAP3Q9BZ76 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CNTNAP3Q9BZ76 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNTNAP3Q9BZ76 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CNTNAP3Q9BZ76 TERF1P5-201ENST00000477545 1207 ntBASIC20.49■□□□□ 0.87
CNTNAP3Q9BZ76 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CNTNAP3Q9BZ76 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.49■□□□□ 0.87
CNTNAP3Q9BZ76 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.49■□□□□ 0.87
CNTNAP3Q9BZ76 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CNTNAP3Q9BZ76 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CNTNAP3Q9BZ76 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CNTNAP3Q9BZ76 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.49■□□□□ 0.87
CNTNAP3Q9BZ76 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.49■□□□□ 0.87
CNTNAP3Q9BZ76 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.48■□□□□ 0.87
CNTNAP3Q9BZ76 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP3Q9BZ76 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP3Q9BZ76 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.48■□□□□ 0.87
CNTNAP3Q9BZ76 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP3Q9BZ76 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.48■□□□□ 0.87
CNTNAP3Q9BZ76 AC008403.3-201ENST00000598924 454 ntBASIC20.48■□□□□ 0.87
CNTNAP3Q9BZ76 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP3Q9BZ76 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CNTNAP3Q9BZ76 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.48■□□□□ 0.87
CNTNAP3Q9BZ76 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP3Q9BZ76 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CNTNAP3Q9BZ76 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CNTNAP3Q9BZ76 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP3Q9BZ76 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CNTNAP3Q9BZ76 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.47■□□□□ 0.87
CNTNAP3Q9BZ76 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP3Q9BZ76 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CNTNAP3Q9BZ76 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CNTNAP3Q9BZ76 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.46■□□□□ 0.87
CNTNAP3Q9BZ76 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CNTNAP3Q9BZ76 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.46■□□□□ 0.87
CNTNAP3Q9BZ76 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNTNAP3Q9BZ76 AC092803.2-201ENST00000564287 1899 ntBASIC20.45■□□□□ 0.86
CNTNAP3Q9BZ76 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNTNAP3Q9BZ76 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CNTNAP3Q9BZ76 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNTNAP3Q9BZ76 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNTNAP3Q9BZ76 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
CNTNAP3Q9BZ76 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNTNAP3Q9BZ76 TSPY15P-201ENST00000457163 923 ntBASIC20.45■□□□□ 0.86
CNTNAP3Q9BZ76 AL121894.2-201ENST00000602977 491 ntBASIC20.45■□□□□ 0.86
CNTNAP3Q9BZ76 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNTNAP3Q9BZ76 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.45■□□□□ 0.86
CNTNAP3Q9BZ76 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNTNAP3Q9BZ76 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.45■□□□□ 0.86
CNTNAP3Q9BZ76 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CNTNAP3Q9BZ76 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.44■□□□□ 0.86
CNTNAP3Q9BZ76 AC096887.2-201ENST00000623443 1957 ntBASIC20.43■□□□□ 0.86
CNTNAP3Q9BZ76 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP3Q9BZ76 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP3Q9BZ76 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP3Q9BZ76 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP3Q9BZ76 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP3Q9BZ76 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.43■□□□□ 0.86
CNTNAP3Q9BZ76 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.43■□□□□ 0.86
CNTNAP3Q9BZ76 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP3Q9BZ76 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.43■□□□□ 0.86
CNTNAP3Q9BZ76 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.43■□□□□ 0.86
CNTNAP3Q9BZ76 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP3Q9BZ76 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.43■□□□□ 0.86
CNTNAP3Q9BZ76 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP3Q9BZ76 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP3Q9BZ76 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP3Q9BZ76 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP3Q9BZ76 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP3Q9BZ76 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
CNTNAP3Q9BZ76 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP3Q9BZ76 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms