Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.04■□□□□ 0.48
HDHD3Q9BSH5 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDHD3Q9BSH5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDHD3Q9BSH5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDHD3Q9BSH5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDHD3Q9BSH5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.03■□□□□ 0.48
HDHD3Q9BSH5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDHD3Q9BSH5 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.03■□□□□ 0.48
HDHD3Q9BSH5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDHD3Q9BSH5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDHD3Q9BSH5 AC073130.3-201ENST00000624389 2278 ntBASIC18.03■□□□□ 0.48
HDHD3Q9BSH5 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDHD3Q9BSH5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDHD3Q9BSH5 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.03■□□□□ 0.48
HDHD3Q9BSH5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDHD3Q9BSH5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDHD3Q9BSH5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDHD3Q9BSH5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HDHD3Q9BSH5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
HDHD3Q9BSH5 AL157384.1-201ENST00000445995 2473 ntBASIC18.03■□□□□ 0.48
HDHD3Q9BSH5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.02■□□□□ 0.48
HDHD3Q9BSH5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
HDHD3Q9BSH5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HDHD3Q9BSH5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.02■□□□□ 0.48
HDHD3Q9BSH5 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HDHD3Q9BSH5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
HDHD3Q9BSH5 MIR3181-201ENST00000578512 73 ntBASIC18.02■□□□□ 0.48
HDHD3Q9BSH5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.02■□□□□ 0.48
HDHD3Q9BSH5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HDHD3Q9BSH5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HDHD3Q9BSH5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.02■□□□□ 0.48
HDHD3Q9BSH5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.02■□□□□ 0.48
HDHD3Q9BSH5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HDHD3Q9BSH5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HDHD3Q9BSH5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HDHD3Q9BSH5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HDHD3Q9BSH5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.01■□□□□ 0.47
HDHD3Q9BSH5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HDHD3Q9BSH5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.01■□□□□ 0.47
HDHD3Q9BSH5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.01■□□□□ 0.47
HDHD3Q9BSH5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HDHD3Q9BSH5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
HDHD3Q9BSH5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.01■□□□□ 0.47
HDHD3Q9BSH5 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.01■□□□□ 0.47
HDHD3Q9BSH5 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.01■□□□□ 0.47
HDHD3Q9BSH5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
HDHD3Q9BSH5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HDHD3Q9BSH5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.01■□□□□ 0.47
HDHD3Q9BSH5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.01■□□□□ 0.47
HDHD3Q9BSH5 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.01■□□□□ 0.47
HDHD3Q9BSH5 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.01■□□□□ 0.47
HDHD3Q9BSH5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HDHD3Q9BSH5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.01■□□□□ 0.47
HDHD3Q9BSH5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18■□□□□ 0.47
HDHD3Q9BSH5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18■□□□□ 0.47
HDHD3Q9BSH5 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HDHD3Q9BSH5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
HDHD3Q9BSH5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18■□□□□ 0.47
HDHD3Q9BSH5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18■□□□□ 0.47
HDHD3Q9BSH5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HDHD3Q9BSH5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18■□□□□ 0.47
HDHD3Q9BSH5 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
HDHD3Q9BSH5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18■□□□□ 0.47
HDHD3Q9BSH5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HDHD3Q9BSH5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HDHD3Q9BSH5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HDHD3Q9BSH5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18■□□□□ 0.47
HDHD3Q9BSH5 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HDHD3Q9BSH5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18■□□□□ 0.47
HDHD3Q9BSH5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HDHD3Q9BSH5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HDHD3Q9BSH5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 AC104564.3-201ENST00000582367 638 ntBASIC17.99■□□□□ 0.47
HDHD3Q9BSH5 AC010525.1-201ENST00000585559 441 ntBASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms