Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A7Q99884 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.57■□□□□ 0.56
SLC6A7Q99884 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A7Q99884 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A7Q99884 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A7Q99884 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.57■□□□□ 0.56
SLC6A7Q99884 AL136967.2-201ENST00000623968 743 ntBASIC18.57■□□□□ 0.56
SLC6A7Q99884 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.57■□□□□ 0.56
SLC6A7Q99884 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.57■□□□□ 0.56
SLC6A7Q99884 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A7Q99884 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A7Q99884 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A7Q99884 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A7Q99884 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A7Q99884 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A7Q99884 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A7Q99884 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A7Q99884 AC073130.3-201ENST00000624389 2278 ntBASIC18.56■□□□□ 0.56
SLC6A7Q99884 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A7Q99884 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A7Q99884 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC6A7Q99884 AP001330.3-201ENST00000520123 633 ntBASIC18.56■□□□□ 0.56
SLC6A7Q99884 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC6A7Q99884 MIR5787-201ENST00000611784 55 ntBASIC18.56■□□□□ 0.56
SLC6A7Q99884 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SLC6A7Q99884 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SLC6A7Q99884 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SLC6A7Q99884 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC6A7Q99884 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC6A7Q99884 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A7Q99884 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SLC6A7Q99884 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC6A7Q99884 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SLC6A7Q99884 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A7Q99884 MIR939-201ENST00000401314 82 ntBASIC18.55■□□□□ 0.56
SLC6A7Q99884 MIR4767-201ENST00000582827 78 ntBASIC18.55■□□□□ 0.56
SLC6A7Q99884 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC6A7Q99884 AC092171.4-201ENST00000609130 632 ntBASIC18.55■□□□□ 0.56
SLC6A7Q99884 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC6A7Q99884 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A7Q99884 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A7Q99884 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC6A7Q99884 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A7Q99884 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A7Q99884 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A7Q99884 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A7Q99884 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC6A7Q99884 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC6A7Q99884 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC6A7Q99884 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SLC6A7Q99884 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC6A7Q99884 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC6A7Q99884 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A7Q99884 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A7Q99884 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SLC6A7Q99884 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.54■□□□□ 0.56
SLC6A7Q99884 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A7Q99884 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.54■□□□□ 0.56
SLC6A7Q99884 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A7Q99884 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.54■□□□□ 0.56
SLC6A7Q99884 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A7Q99884 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A7Q99884 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A7Q99884 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A7Q99884 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A7Q99884 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
SLC6A7Q99884 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A7Q99884 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A7Q99884 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A7Q99884 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A7Q99884 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A7Q99884 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.53■□□□□ 0.56
SLC6A7Q99884 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A7Q99884 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SLC6A7Q99884 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A7Q99884 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A7Q99884 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SLC6A7Q99884 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC6A7Q99884 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SLC6A7Q99884 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A7Q99884 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SLC6A7Q99884 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A7Q99884 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC6A7Q99884 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC6A7Q99884 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A7Q99884 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.52■□□□□ 0.56
SLC6A7Q99884 AC091305.1-201ENST00000479476 895 ntBASIC18.52■□□□□ 0.56
SLC6A7Q99884 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC6A7Q99884 AC099791.2-201ENST00000605725 427 ntBASIC18.52■□□□□ 0.56
SLC6A7Q99884 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC6A7Q99884 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A7Q99884 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A7Q99884 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A7Q99884 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SLC6A7Q99884 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC6A7Q99884 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC6A7Q99884 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SLC6A7Q99884 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.55
SLC6A7Q99884 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A7Q99884 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms