Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.5■□□□□ 0.55
GFI1Q99684 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GFI1Q99684 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
GFI1Q99684 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
GFI1Q99684 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
GFI1Q99684 AL049796.1-201ENST00000565336 1766 ntBASIC18.5■□□□□ 0.55
GFI1Q99684 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GFI1Q99684 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
GFI1Q99684 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GFI1Q99684 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
GFI1Q99684 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GFI1Q99684 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GFI1Q99684 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GFI1Q99684 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GFI1Q99684 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.49■□□□□ 0.55
GFI1Q99684 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GFI1Q99684 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
GFI1Q99684 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
GFI1Q99684 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GFI1Q99684 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
GFI1Q99684 OXCT2P1-201ENST00000447263 1535 ntBASIC18.49■□□□□ 0.55
GFI1Q99684 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GFI1Q99684 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GFI1Q99684 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.48■□□□□ 0.55
GFI1Q99684 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
GFI1Q99684 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
GFI1Q99684 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GFI1Q99684 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GFI1Q99684 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.48■□□□□ 0.55
GFI1Q99684 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
GFI1Q99684 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.48■□□□□ 0.55
GFI1Q99684 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
GFI1Q99684 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.48■□□□□ 0.55
GFI1Q99684 AL451085.2-201ENST00000605085 799 ntBASIC18.48■□□□□ 0.55
GFI1Q99684 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GFI1Q99684 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
GFI1Q99684 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GFI1Q99684 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.48■□□□□ 0.55
GFI1Q99684 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GFI1Q99684 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
GFI1Q99684 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GFI1Q99684 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GFI1Q99684 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
GFI1Q99684 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
GFI1Q99684 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GFI1Q99684 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
GFI1Q99684 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GFI1Q99684 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
GFI1Q99684 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GFI1Q99684 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
GFI1Q99684 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.47■□□□□ 0.55
GFI1Q99684 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GFI1Q99684 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.47■□□□□ 0.55
GFI1Q99684 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GFI1Q99684 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
GFI1Q99684 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
GFI1Q99684 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.46■□□□□ 0.55
GFI1Q99684 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GFI1Q99684 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
GFI1Q99684 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GFI1Q99684 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
GFI1Q99684 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.46■□□□□ 0.55
GFI1Q99684 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
GFI1Q99684 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
GFI1Q99684 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GFI1Q99684 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.46■□□□□ 0.55
GFI1Q99684 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
GFI1Q99684 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.46■□□□□ 0.55
GFI1Q99684 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.46■□□□□ 0.55
GFI1Q99684 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GFI1Q99684 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
GFI1Q99684 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.46■□□□□ 0.54
GFI1Q99684 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
GFI1Q99684 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GFI1Q99684 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GFI1Q99684 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GFI1Q99684 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.45■□□□□ 0.54
GFI1Q99684 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.45■□□□□ 0.54
GFI1Q99684 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GFI1Q99684 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GFI1Q99684 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GFI1Q99684 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.45■□□□□ 0.54
GFI1Q99684 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GFI1Q99684 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.45■□□□□ 0.54
GFI1Q99684 MTDHP2-201ENST00000601468 714 ntBASIC18.45■□□□□ 0.54
GFI1Q99684 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GFI1Q99684 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GFI1Q99684 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GFI1Q99684 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.45■□□□□ 0.54
GFI1Q99684 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GFI1Q99684 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GFI1Q99684 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.45■□□□□ 0.54
GFI1Q99684 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
GFI1Q99684 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
GFI1Q99684 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.45■□□□□ 0.54
GFI1Q99684 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GFI1Q99684 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GFI1Q99684 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.44■□□□□ 0.54
GFI1Q99684 AC133637.1-201ENST00000624115 1537 ntBASIC18.44■□□□□ 0.54
GFI1Q99684 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms