Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ATP6V0A1Q93050 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ATP6V0A1Q93050 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ATP6V0A1Q93050 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
ATP6V0A1Q93050 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ATP6V0A1Q93050 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
ATP6V0A1Q93050 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ATP6V0A1Q93050 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.01■■□□□ 1.43
ATP6V0A1Q93050 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.01■■□□□ 1.43
ATP6V0A1Q93050 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.01■■□□□ 1.43
ATP6V0A1Q93050 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
ATP6V0A1Q93050 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ATP6V0A1Q93050 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC24.01■■□□□ 1.43
ATP6V0A1Q93050 AC055733.4-201ENST00000638462 1354 ntBASIC24.01■■□□□ 1.43
ATP6V0A1Q93050 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
ATP6V0A1Q93050 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ATP6V0A1Q93050 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24■■□□□ 1.43
ATP6V0A1Q93050 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24■■□□□ 1.43
ATP6V0A1Q93050 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC24■■□□□ 1.43
ATP6V0A1Q93050 AC006970.2-201ENST00000450065 779 ntBASIC24■■□□□ 1.43
ATP6V0A1Q93050 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC24■■□□□ 1.43
ATP6V0A1Q93050 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC24■■□□□ 1.43
ATP6V0A1Q93050 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC24■■□□□ 1.43
ATP6V0A1Q93050 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ATP6V0A1Q93050 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC24■■□□□ 1.43
ATP6V0A1Q93050 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24■■□□□ 1.43
ATP6V0A1Q93050 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
ATP6V0A1Q93050 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ATP6V0A1Q93050 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ATP6V0A1Q93050 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
ATP6V0A1Q93050 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ATP6V0A1Q93050 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
ATP6V0A1Q93050 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ATP6V0A1Q93050 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
ATP6V0A1Q93050 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.99■■□□□ 1.43
ATP6V0A1Q93050 CROCCP5-201ENST00000436658 830 ntBASIC23.99■■□□□ 1.43
ATP6V0A1Q93050 AC104187.1-201ENST00000607510 612 ntBASIC23.99■■□□□ 1.43
ATP6V0A1Q93050 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.99■■□□□ 1.43
ATP6V0A1Q93050 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.99■■□□□ 1.43
ATP6V0A1Q93050 KRT87P-202ENST00000534226 1464 ntBASIC23.99■■□□□ 1.43
ATP6V0A1Q93050 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
ATP6V0A1Q93050 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ATP6V0A1Q93050 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATP6V0A1Q93050 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATP6V0A1Q93050 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.98■■□□□ 1.43
ATP6V0A1Q93050 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATP6V0A1Q93050 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.98■■□□□ 1.43
ATP6V0A1Q93050 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ATP6V0A1Q93050 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATP6V0A1Q93050 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATP6V0A1Q93050 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ATP6V0A1Q93050 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.98■■□□□ 1.43
ATP6V0A1Q93050 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.98■■□□□ 1.43
ATP6V0A1Q93050 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.98■■□□□ 1.43
ATP6V0A1Q93050 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.98■■□□□ 1.43
ATP6V0A1Q93050 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATP6V0A1Q93050 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ATP6V0A1Q93050 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
ATP6V0A1Q93050 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATP6V0A1Q93050 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATP6V0A1Q93050 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.98■■□□□ 1.43
ATP6V0A1Q93050 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.98■■□□□ 1.43
ATP6V0A1Q93050 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATP6V0A1Q93050 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATP6V0A1Q93050 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ATP6V0A1Q93050 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.97■■□□□ 1.43
ATP6V0A1Q93050 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.97■■□□□ 1.43
ATP6V0A1Q93050 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ATP6V0A1Q93050 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
ATP6V0A1Q93050 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATP6V0A1Q93050 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
ATP6V0A1Q93050 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATP6V0A1Q93050 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ATP6V0A1Q93050 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
ATP6V0A1Q93050 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.96■■□□□ 1.43
ATP6V0A1Q93050 AP006587.3-201ENST00000525742 1516 ntBASIC23.96■■□□□ 1.43
ATP6V0A1Q93050 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATP6V0A1Q93050 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.96■■□□□ 1.43
ATP6V0A1Q93050 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.96■■□□□ 1.43
ATP6V0A1Q93050 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ATP6V0A1Q93050 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ATP6V0A1Q93050 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATP6V0A1Q93050 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.96■■□□□ 1.43
ATP6V0A1Q93050 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
ATP6V0A1Q93050 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
ATP6V0A1Q93050 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
ATP6V0A1Q93050 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ATP6V0A1Q93050 AC080038.3-201ENST00000623346 1952 ntBASIC23.95■■□□□ 1.42
ATP6V0A1Q93050 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
ATP6V0A1Q93050 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ATP6V0A1Q93050 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.95■■□□□ 1.42
ATP6V0A1Q93050 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
ATP6V0A1Q93050 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.95■■□□□ 1.42
ATP6V0A1Q93050 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
ATP6V0A1Q93050 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.95■■□□□ 1.42
ATP6V0A1Q93050 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ATP6V0A1Q93050 AC104771.1-201ENST00000603335 964 ntBASIC23.95■■□□□ 1.42
ATP6V0A1Q93050 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.95■■□□□ 1.42
ATP6V0A1Q93050 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
ATP6V0A1Q93050 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms